Gene RoseRS_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3313 
Symbol 
ID5210288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4163004 
End bp4164017 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID640596909 
Producthypothetical protein 
Protein accessionYP_001277624 
Protein GI148657419 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.788444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGC AGAACCGTGA GCGTTATACA ACGGAACCTC TCCCGTCGTC AAGAGATACC 
CCTTCGTCGC GTCTGCCTGG TGAGATCTAT GATCGACAAC CTGCTTCGTC GCAGCGTCGC
AGTGCGTCGC TTGTTGGTCT GGTACTGCTG ACGCTCGGAA TAGCCTGGCT GCTGGTGCGA
TTTGCCGGTG ATCTGATACC GGTGACGCCC GGTGGTGCGC TTCTGGTCGA TCAGACGGTC
GGCGGACGCC GGATCGAGAT CGATGCCGTC AGCGCCGATG TGACCATTCT ACGCTGGGAT
CGACCAGAGT TTCGCGTTCA GGCGGAGCGG GTGGGTTGGT CAACCGGCGC TATCGATGTG
TCGGTACGCG TCGATGACGA AACGGTGCGT GTGGCGCACC GTACCAGTTG CCTGTTCTTT
TGCGGCGGGT TGCGCTACCA GATCACGGCG CCGACCACGG CGGACATTCG CGTGACCACG
GCGAGCGGCG ATGTGCAGAT CGAGGCGATT GACGGCGATG TGACGATTGA AACGACCAGC
GGCGATGTGC GTCTTGATGC TATTGGCGGG GCGTTGGCGG TCAAAACTGT CAGTGGCGAT
GTAACCCTGC GCAACGGGCG GGTTCCGCGC GCCAGAGTTG CGACGACCAG CGGTGACGTG
AACCTGAGCG GCGTCAGAGG TCCGCTGGAG GCAACAAGCA TTTCTGGCGA CATCAGTATC
CGCGACGTTG TTGAGGGTCC GGTTAACGTG AACACCACCA GCGGGCGGAT CAGCGGCGCT
GGCGCTCTTT CCGTCGATCT GAATCTGTCC AGTGTGTCGG GCGATGTGCA ACTGGACCTT
CCGGCTGATA CTGGCTTCCG GTTATCCATT CAGACAATCA GCGGCGATAT TGATGCGCCA
GGGTTGCGTG GCGGAGGGGT GCGGAGCGAA TGGAGCGCCA CTCTGGGTGA TGGAGCGCAT
GCGGTGAATA TCACCACGAC CAGCGGGGAC GTGCGTATCA GGCAGGAGAG ATGA
 
Protein sequence
MEEQNRERYT TEPLPSSRDT PSSRLPGEIY DRQPASSQRR SASLVGLVLL TLGIAWLLVR 
FAGDLIPVTP GGALLVDQTV GGRRIEIDAV SADVTILRWD RPEFRVQAER VGWSTGAIDV
SVRVDDETVR VAHRTSCLFF CGGLRYQITA PTTADIRVTT ASGDVQIEAI DGDVTIETTS
GDVRLDAIGG ALAVKTVSGD VTLRNGRVPR ARVATTSGDV NLSGVRGPLE ATSISGDISI
RDVVEGPVNV NTTSGRISGA GALSVDLNLS SVSGDVQLDL PADTGFRLSI QTISGDIDAP
GLRGGGVRSE WSATLGDGAH AVNITTTSGD VRIRQER