Gene RoseRS_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3279 
Symbol 
ID5210254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4130944 
End bp4131771 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content60% 
IMG OID640596875 
Producthypothetical protein 
Protein accessionYP_001277590 
Protein GI148657385 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.94053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAG TTCTGACCAT CACGTGGTTA ACCTTTCACG AAGCGCGGCG GCGACGTATG 
GTGCTGGCGG CGCTGATCAT TGGCGCTCTG TTTGTGGCGT TGTTTGGCAT CGGCGTGTGG
CTGATTGCCC GCGAAATGGA ACGGAACGCG CCACTGGCGA TCCAGCGTCA GGCGCAGAGT
TTCCTGCTGA TCGCCGGTCT CTATGTGGTC CACTTCCTGA CGATTATGCT GGCAATTTTC
GCCTCAGTCG ATACAGTTGC TGGCGAAATC TCGACGCATA CCATCCAGGC GCTGGTGACA
CGCCCGATCC GCCGCTGGCA GACGCTGCTT GGCAAATGGA TCGGCTTTGC CCTTATGCTG
ACGGGGTACC TGGGGCTGCT GAGCCTTGGC GTCGTTGCTG CGATGTGGCT GATCGTCGGA
TACTGGCCCC CCAATGTTGC AGTCGGGCTG CCGTTGCTGG CGCTTGAAGC CCTGACTCTC
CTCTCTCTCT CGCTCCTTGG CGGCACGCGC CTCTCGACGC TGACGAATGG CGTGGCGCTC
TTTTTGCTCT ATGGGCTGGC GTTCATTGGC TCGTGGGTCG AACAGATCGG CGCGCTGCTG
CAATCGAGCG ATGCGGTGCG GATCGGCATT ATTACCAGTC TGCTGTTGCC GGTTGAGGCG
CTGTGGCGAC GCGTTGCCTA TCTGATGCAA CCGCCGCTGG CGAATAATCT CCCCGGACCG
TTTTCAACCG CTTCCGTCCC CAGTGAGGCG ATGGTTATCT ACGCTGTGGT GTACGCTGCC
GTTGCGCTGC TACTGGCGAT GCGTTCGTTT GGACAACGCG ACCTCTGA
 
Protein sequence
MNAVLTITWL TFHEARRRRM VLAALIIGAL FVALFGIGVW LIAREMERNA PLAIQRQAQS 
FLLIAGLYVV HFLTIMLAIF ASVDTVAGEI STHTIQALVT RPIRRWQTLL GKWIGFALML
TGYLGLLSLG VVAAMWLIVG YWPPNVAVGL PLLALEALTL LSLSLLGGTR LSTLTNGVAL
FLLYGLAFIG SWVEQIGALL QSSDAVRIGI ITSLLLPVEA LWRRVAYLMQ PPLANNLPGP
FSTASVPSEA MVIYAVVYAA VALLLAMRSF GQRDL