Gene RoseRS_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3259 
Symbol 
ID5210234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4110022 
End bp4110768 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID640596855 
Producthypothetical protein 
Protein accessionYP_001277570 
Protein GI148657365 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0220331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGG AACAAACCGC TGTCGATCTC AAATACCTGC ATACGCTGCT GGTCGAGCGG 
ATGAAAGTCA AGCGGCGACC GGTGGCGGTG ACGTACTGCG AAGATCGACC GCCTCCAGGC
TATGAGCCAG CGAATGTTGT GGCGTGCGCG ATTATCCGTG AGGCGGAAGC AGGACGACGG
GTGTATGTCG ATGCGCACCA CCACGACTGC TGGGTCGGGC AGTATCACCT TGGCTGGCTG
CCGGACGCCG GGCGTCTGAT CACCGAAGGG CAGTATCTGA CGATGGCGCA GGGGTTTTTT
ACCGAAGAAG GCGCACGGCG CAACAAAGCG CAGAGTTCCG TGCTGCCCAC CGGTTCGATT
GCCGCGCTGG CCGCCGCGCC GCTTGACGAT GTGCCGGATG GCGTGCCGGT CGATCTGCTG
GTCTGCATTA CCGACCCGAT GCATGCCATG CAGATTGCAG GCGCGGCATC GGTGCGGGAG
GGAACGTTCC CCATCGGTGA GTTGGGACCG TCTGCATGTG CGTCGATCTT TGCGACGCCG
CGCCTCAAGC GCAACAGTGT CTTCGCAACC GGCGACGGCG GCGGACGGAT GCACAATCGG
GTGGCGCCGG GTGAGATGTT TATTGCGGTG CCGCGAGAAC ATTTCCGGTA CATCGTCGAG
TTGATCGAGA ACTTCAGGAT CGATCCGGAG GAGATGCGAC GGTTGATCAT GCCGTCGCAC
GCACGGAAAG GAAACGATGG GTCGTGA
 
Protein sequence
MLAEQTAVDL KYLHTLLVER MKVKRRPVAV TYCEDRPPPG YEPANVVACA IIREAEAGRR 
VYVDAHHHDC WVGQYHLGWL PDAGRLITEG QYLTMAQGFF TEEGARRNKA QSSVLPTGSI
AALAAAPLDD VPDGVPVDLL VCITDPMHAM QIAGAASVRE GTFPIGELGP SACASIFATP
RLKRNSVFAT GDGGGRMHNR VAPGEMFIAV PREHFRYIVE LIENFRIDPE EMRRLIMPSH
ARKGNDGS