Gene RoseRS_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3180 
Symbol 
ID5210151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4003490 
End bp4004551 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content60% 
IMG OID640596772 
ProductATP phosphoribosyltransferase 
Protein accessionYP_001277491 
Protein GI148657286 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase
[TIGR03455] ATP phosphoribosyltransferase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.200263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTT TCGGAGAGAT GGCAATTCTT CAGAGAAGCG ATATGACGTT GCGTTTTGCC 
ATACCATCGA AGGGCAGTTT GTACGATGGT ACGATCGCCT TTCTTGAGAG CGCCGGATTG
CGCGTGGCGC GCCCGAATCC ACGCCGTTAC ACGGCTTCCA TTCGCGCACT TCCCGGAGCA
GACGTGCTGC TTCATCGACC GACAGACATC GTCGAAAAAG TGGCGGCAGG CGAAATCGAT
CTCGGGATTA GCGGTCTTGA TCTGGTGGAA GAACTGCGCG GCGACCGTGA TGATCTGATC
GTTTTGTTTG ATGATCTTGG CTATGGCGCT GCCGAACTGG TCGTCGCCGT CCCGGAGACC
TGGATCGATG TGACGTCCTG GCATGATCTG GCGGATCTGG CAGTCGAGTT GCACAGTCAG
GGCCGTCCGC TGCGTATTGC AACCAAATAC CCGTCGCTGA CCCGTCGTTT CTGCTATGCG
AATGGCATTA ACTACTTCCG TCTCGTTGAG TCGCAGGGGG CGACCGAAGC AGCGCCGGGG
CTTGGGTACG CCGACATCAT TGTGGATATT ACGGAAACCG GCGTGACGCT GCGCGATAAC
CAGTTGAAGA TCGTTGGCGA GCCGATTCTC CGTACTCAGG CATGTCTGAT CGCGAGTCGT
CGCTGTTTGC GCGCCAATCC TGCGGCGCTG GCAGCAACCC GTACCGTGCT GGAACTGGTC
GAGGCGCGGC GGCGCGCGCG TCGTTTCGTG CAGGTGACGG CGAATATCGC CGGTGAGTCG
GTGGAAGATG TGGGACGTCG TGTGGCGGTC CGCTCTGACC TTGCCGGTGT GCAGGGACCG
ACAATAGCGC CGGTCTGGCC CAGCACGTCG CGCGCTGCGG GTGCACCCGG ATGGTACATG
GTCACGCTGC TTATACCACA GGATCGGGTG CTCGATCTGA CGGCGCATCT CCGTCAACTC
GGCGGTGACA CCATCACGGT TGTACCGGCG CAGTATGTGT TCGATGCAAC CTGCAGCAGT
TATCATCGTT TGCTGGAGTT GCTCGAGGAA CAGACGCCAT GA
 
Protein sequence
MAGFGEMAIL QRSDMTLRFA IPSKGSLYDG TIAFLESAGL RVARPNPRRY TASIRALPGA 
DVLLHRPTDI VEKVAAGEID LGISGLDLVE ELRGDRDDLI VLFDDLGYGA AELVVAVPET
WIDVTSWHDL ADLAVELHSQ GRPLRIATKY PSLTRRFCYA NGINYFRLVE SQGATEAAPG
LGYADIIVDI TETGVTLRDN QLKIVGEPIL RTQACLIASR RCLRANPAAL AATRTVLELV
EARRRARRFV QVTANIAGES VEDVGRRVAV RSDLAGVQGP TIAPVWPSTS RAAGAPGWYM
VTLLIPQDRV LDLTAHLRQL GGDTITVVPA QYVFDATCSS YHRLLELLEE QTP