Gene RoseRS_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3171 
Symbol 
ID5210142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3994171 
End bp3994737 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID640596763 
Productsugar isomerase (SIS) 
Protein accessionYP_001277482 
Protein GI148657277 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG ACAGGTATCT TGCTTCGCTG GCTGAAACGC TTGCAGCCGT TCCCCGTGAG 
CCGCTGCGCG CGATCGAAGA GACATTGTGG CAAACGTATC TCCGCGACGG GACGATTATT
ATCTGTGGAA ATGGCGGCAG TGCTGCAACC GCGTCGCATT TTGCGTGCGA CCTGGCGAAG
TGGACGATTT CCGACGGGCG CCGCCGTTTG CGTGCGCTTG CGCTGACCGA CAATGTGCCG
GTGATGACGG CATGGTCGAA CGACACGGCG TATGAGCGCG TGTTTGTCGA GCAGGTCATG
TCGCTCTACC GTCCTGGCGA TACGCTGGTC GCCATTTCAG GGAGCGGCAA TTCACCGAAT
GTGCTGCGCG CGGTTGAGTG GATGGCGTCG CAGGGCGCCG TGACGATTGG ACTGACCGGC
TTTAACGGCG GGAAACTGGC AACGCTGGCG CAGATTGCGG TCGTTGTTCC CAGCCATTTT
ATGCCCGAAG TCGAAGATGT GCACATCGCT ATTTGCCACA GCCTGGCAGT GGCATTGGGT
GAGCGGATTG GCATCGAATG TCTATGA
 
Protein sequence
MSVDRYLASL AETLAAVPRE PLRAIEETLW QTYLRDGTII ICGNGGSAAT ASHFACDLAK 
WTISDGRRRL RALALTDNVP VMTAWSNDTA YERVFVEQVM SLYRPGDTLV AISGSGNSPN
VLRAVEWMAS QGAVTIGLTG FNGGKLATLA QIAVVVPSHF MPEVEDVHIA ICHSLAVALG
ERIGIECL