Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3171 |
Symbol | |
ID | 5210142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3994171 |
End bp | 3994737 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596763 |
Product | sugar isomerase (SIS) |
Protein accession | YP_001277482 |
Protein GI | 148657277 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG ACAGGTATCT TGCTTCGCTG GCTGAAACGC TTGCAGCCGT TCCCCGTGAG CCGCTGCGCG CGATCGAAGA GACATTGTGG CAAACGTATC TCCGCGACGG GACGATTATT ATCTGTGGAA ATGGCGGCAG TGCTGCAACC GCGTCGCATT TTGCGTGCGA CCTGGCGAAG TGGACGATTT CCGACGGGCG CCGCCGTTTG CGTGCGCTTG CGCTGACCGA CAATGTGCCG GTGATGACGG CATGGTCGAA CGACACGGCG TATGAGCGCG TGTTTGTCGA GCAGGTCATG TCGCTCTACC GTCCTGGCGA TACGCTGGTC GCCATTTCAG GGAGCGGCAA TTCACCGAAT GTGCTGCGCG CGGTTGAGTG GATGGCGTCG CAGGGCGCCG TGACGATTGG ACTGACCGGC TTTAACGGCG GGAAACTGGC AACGCTGGCG CAGATTGCGG TCGTTGTTCC CAGCCATTTT ATGCCCGAAG TCGAAGATGT GCACATCGCT ATTTGCCACA GCCTGGCAGT GGCATTGGGT GAGCGGATTG GCATCGAATG TCTATGA
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Protein sequence | MSVDRYLASL AETLAAVPRE PLRAIEETLW QTYLRDGTII ICGNGGSAAT ASHFACDLAK WTISDGRRRL RALALTDNVP VMTAWSNDTA YERVFVEQVM SLYRPGDTLV AISGSGNSPN VLRAVEWMAS QGAVTIGLTG FNGGKLATLA QIAVVVPSHF MPEVEDVHIA ICHSLAVALG ERIGIECL
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