Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3170 |
Symbol | |
ID | 5210141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3993236 |
End bp | 3994180 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640596762 |
Product | ROK family protein |
Protein accession | YP_001277481 |
Protein GI | 148657276 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATGA CACTCGTCCT TGGTCTCGAT TTTGGCGGCA CGAAACTTGC CGCCGGTCTG GTTGATCTTC AGCAAGGCAG TGTGCTGGCG CGCCGCTCGA TGGCAACGCC GGTGTCCGGT GGCGCGTCTG CCAGCCTCCA GGCGATGCTG GCAATGGCGC AGGCGTTGAT CGCGGCTGCG CCTGCGCCTG TGCAGGGCGT CGGCATCAGT TTTGGCGGAC CGGTTGCAGC GGATGGGCGC ACGGTGCGTC TCTCGATGCA CGTTGCCGGA TGGGATCAGG TTCCTCTGGC GAGGCATGTC GAGGGGGCGC TTGGGTTGCC TGCTATCGTT GCCAATGATG GCGACGCGGC AGCGCTGGCG GAGTACCGTT TCGGCGCCGG GCAGGGTGTG CGCCATCTGC TGTATCTGAC CGTCAGCACC GGTATTGGCG GCGGCATAAT CATCGACGGG CGCCTGCATC GTGGCGAACG CGCCTGGGCG GGCGAGGCGG GGCATCAGGT GCTGAAGCCC GACGGTCCAC CCTGCCCATG TGGGCGCAAC GGCTGTCTGG AGGCGCTGGC GTCGGGTTTG TCGATCGCCC GCGAGGCACG GTTGCGGTTG CGGGGACCTG ACGGCGCAAC CAGCGCGCTG GCTGCCATCC CGTCCGATGC GTTAACCGCG CAGCATGTCG CAGAAGCAGC GGCGGCTGGC GATGCGCTGG CGCGCACGGT GTGGAACGAG GCGATGGGAT GGTTAGGGAT CGGCATCGCT TCAGCCGCCA ACCTGCTCAA TCCCGGGCGT GTCGTGCTTG GCGGCGGGTT GACCCGCGCC GGTGCGCTCC TGTTCGACCC GGTGCGCCAC GTCGTTGCGC GACGTGTGAT CGATCCAGAA GTGAGCGTCG TGCCTGCCGC GCTTGGCGAT GATGTTGGCA TCCTGGGGGG TGCGGCGCTG CTGCGCGAAT CTTGA
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Protein sequence | MSMTLVLGLD FGGTKLAAGL VDLQQGSVLA RRSMATPVSG GASASLQAML AMAQALIAAA PAPVQGVGIS FGGPVAADGR TVRLSMHVAG WDQVPLARHV EGALGLPAIV ANDGDAAALA EYRFGAGQGV RHLLYLTVST GIGGGIIIDG RLHRGERAWA GEAGHQVLKP DGPPCPCGRN GCLEALASGL SIAREARLRL RGPDGATSAL AAIPSDALTA QHVAEAAAAG DALARTVWNE AMGWLGIGIA SAANLLNPGR VVLGGGLTRA GALLFDPVRH VVARRVIDPE VSVVPAALGD DVGILGGAAL LRES
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