| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3140 |
|---|
| Symbol | |
|---|
| ID | 5210110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3948851 |
|---|
| End bp | 3950227 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640596731 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277451 |
|---|
| Protein GI | 148657246 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.182787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA ATCCAGCCCT GATCGCGTCG GTATGTGCAT TGTTGGTTTC CATTCTCTTC
GCCGCCGGTT TGAGCCTTGC CGCTCCCTCA TCAGCGCATT TCCCCTCTGT ACAGATCACG
CTTGCGTCTG GCGATCCGCC TGCACCGATG GACGTGCAGG TTGAGTCTGG CGCCGCGGTT
GTCTGGCGCA ATAACGACAC ACAGGCACAC CGTCTCCGCT CTGTCGATGG CAGCTGGAGA
TCGCCGGTCA TCGCGCTAGG ATCAGATCGG CATCAGGTAT TCGTTGAGCC TGGACGCTAT
CCTTTTGTTT GCGATTTCGA TCCAGGGATG AGCGGTGTGC TCACCGTTCA GCCTGATGCG
TACCGCGTAT TCCTGCCGCT GGTGATCCGC AGCGCACCGG GAGCGCAATC CGGCGAGCGC
TGGTCGAACC CGGCGACGTG GGGCGGGCGT GTGCCGCAGA GTGGAGATGC GGCAACCATC
CCGGCGGGCA AGGTCGTTCT GCTCGATGTC AGCCCGCCGC CGTTACAGAG TCTGACCATC
GAAGGCGAAT TGGTCTTTGA TCGGCGCGAT CTCGATCTGA CTGTCGGCTG GATCATGCTG
CATGGTCAGG GACGCCTGCG CATTGGCACG CCAGCCGAAC CGTTCGCCCA TCGCGCGACG
ATTACCCTCA ACGCGCCCAA TCCGAACGAA GATGTGATGG GAATGGGCAC GCGCGGCATA
CTGCTCATGG GCGGTTCCTT CGAAGCGTAT GGCGTGATGC CGAATCGTGT GTGGACGAAA
CTGAACGACC ATGCCGCTGC CGGTGCAACC ACGCTTACCC TCAGCGATAC GGTGAACTGG
CAGCCCGGCG CCCAGATTGT CATCGCGCCA ACCGACTTCT ACGGTGTGGC GGAAACCGAA
CGACATACAG CACAGGCGGT GAACGGCGCC CGGGTCACGC TGGCGACGCC TCTGCAAACA
TCACGCTGGG GTCGGTTGCA GTATGTCAGT TCCACCGGAA TGACCACGAC GCCGACAACG
GAAGTAACGC CGCTCGTGCT CGATGAACGC GCCGAAGTGG GACTGCTCTC GCGTCAGATC
GTGATTCAGG GCGCCGATGA TGCACGCTGG CGCAATGACC GCTTTGGCGC TCAGATCATG
GTGATGGGGA GCGGGGTCTT GCGCCTCGAT GGCGTTGAAC TGCGGCGCGT CGGACAGGGC
GGGCGTCCCG GTCGCTATCC GATCCACTTC CATCTGCTTT CGTATGCAGC AGACGGCAGC
CTGATCGGTG ATGCGACTCA GCAACTGGTC ACCAACTCAA GCATCTGGAA TTCGACCAAC
CGCTGCATAA CGTCATGCCA CAAATGGCAC AACGATTCGC AACAATATCT GCTATGA
|
|---|
| Protein sequence | MQRNPALIAS VCALLVSILF AAGLSLAAPS SAHFPSVQIT LASGDPPAPM DVQVESGAAV
VWRNNDTQAH RLRSVDGSWR SPVIALGSDR HQVFVEPGRY PFVCDFDPGM SGVLTVQPDA
YRVFLPLVIR SAPGAQSGER WSNPATWGGR VPQSGDAATI PAGKVVLLDV SPPPLQSLTI
EGELVFDRRD LDLTVGWIML HGQGRLRIGT PAEPFAHRAT ITLNAPNPNE DVMGMGTRGI
LLMGGSFEAY GVMPNRVWTK LNDHAAAGAT TLTLSDTVNW QPGAQIVIAP TDFYGVAETE
RHTAQAVNGA RVTLATPLQT SRWGRLQYVS STGMTTTPTT EVTPLVLDER AEVGLLSRQI
VIQGADDARW RNDRFGAQIM VMGSGVLRLD GVELRRVGQG GRPGRYPIHF HLLSYAADGS
LIGDATQQLV TNSSIWNSTN RCITSCHKWH NDSQQYLL
|
|---|
| |