Gene RoseRS_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3133 
Symbol 
ID5210103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3934161 
End bp3934517 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content57% 
IMG OID640596725 
Producthypothetical protein 
Protein accessionYP_001277445 
Protein GI148657240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00432489 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGATT TCAACAACCT GCCGCTCATT CTGGCTGGGC CGATTGTGCG ACGCGTCGAA 
CCAACGCTGG TAGCAGTCTG GGTTGCCCTT TCCGATGCGC GCACGGTAGA ACTTGGCATC
TGGACCGGTA TCACCAATGT CGGCAGTTCC GGTGTCTTGT TCGGCAATAC ATTGGCGGGA
TGGAAGGCGA CGGCTGCATC CATTCCGATC GGCGCGAAAC TGCATATCGC GCTGGTCACG
CTCGACCTTA CCGCAAGCCC GCTGATTCCA GGGCAGATCT ACAGCTATAA CCTGGTCTTC
ACCGGAGGGA GTTCGTCCCA GGATACCTTG ATTGCTAGTT CATGTTCGTA CAGATGA
 
Protein sequence
MPDFNNLPLI LAGPIVRRVE PTLVAVWVAL SDARTVELGI WTGITNVGSS GVLFGNTLAG 
WKATAASIPI GAKLHIALVT LDLTASPLIP GQIYSYNLVF TGGSSSQDTL IASSCSYR