Gene RoseRS_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3118 
SymbolrecA 
ID5210087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3917502 
End bp3918563 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID640596710 
Productrecombinase A 
Protein accessionYP_001277431 
Protein GI148657226 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000163831 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000179844 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCCCTCT CCCCGGAAAA GGAAAAGGCT CTGGCAGCAG CCATGAGCCA GATCGACCGC 
AAATACGGCA AGGGCTCGAT CATGCGGATG GGGGAAGTCA GTTCCAAACT GGCGATCGAA
GTCATCCCCA CCGGGTCGAT TGCGCTCGAC ATTGCGCTGG GCGTCGGCGG CGTGCCACGG
GGTCGGGTTG TCGAAATCTA CGGTCCGGAG TCCAGCGGTA AAACGACCCT GGCGCAGCAT
ATCATCGCTG AGGCGCAGAA GATGGGCGGC ATCGCCGCCT TCATCGACGC CGAGCATGCG
TTCGATCCGG TCTATGCAGC ACGATGCGGC GTTGATGTCA ACAATCTGCT GGTCTCGCAA
CCCGATTACG GTGAGCAGGC GCTTGAGATC TGCGAAGCGC TGGTGCGCTC GAATGCGGTC
GATGTCGTAG TGGTCGACTC GGTTGCTGCG CTGGTGCCGC GCGCTGAGAT CGAAGGCGAC
ATGGGCGACT CGCTCCCCGG TCTGCAGGCG CGGTTAATGA GCCAGGCGCT GCGCAAACTT
TCCGGCGCCA TCAGCAAATC ACGCGCGGTT GTCATTTTTC TCAACCAGCT CCGCCTGAAG
ATCGGCGTGA TGTTCGGCTC GCCGGAGACT ACCACCGGCG GTCAGGCGCT GAAGTTCTAC
GCATCGGTGC GGATGGACAT CCGCCGCATT GAGACGCTCA AGAACGGTCA GGAGACGATC
GGCAGTCGCA CGCGGGTGAA GGTGGTCAAG AACAAGGTCG CGCCGCCCTT CCGCCAGGCG
GAGTTCGATA TTATGCACAA CGAGGGCATC TCGCGCGCTG GCAATATCCT TGATGTCGGC
GTCGAACTCG ACATCATTCG CAAGAGCGGC GCCTGGTTCT ATCTCGGCGA CGATCGCCTG
GGTCAGGGGC GCGAAAATGC CAAGCAGTTC CTGAACGAAA ACCCGGCGCT GGCAGATGAA
ATTGAGCGCC TGATCCGCGC TCACGCAATG GCGGCGCCGA TCTCGATTGT ATCGCCCAAA
GAAGACGATG CCGTAGAAGA CGCAGGACTG TTCGAGGAAT AG
 
Protein sequence
MALSPEKEKA LAAAMSQIDR KYGKGSIMRM GEVSSKLAIE VIPTGSIALD IALGVGGVPR 
GRVVEIYGPE SSGKTTLAQH IIAEAQKMGG IAAFIDAEHA FDPVYAARCG VDVNNLLVSQ
PDYGEQALEI CEALVRSNAV DVVVVDSVAA LVPRAEIEGD MGDSLPGLQA RLMSQALRKL
SGAISKSRAV VIFLNQLRLK IGVMFGSPET TTGGQALKFY ASVRMDIRRI ETLKNGQETI
GSRTRVKVVK NKVAPPFRQA EFDIMHNEGI SRAGNILDVG VELDIIRKSG AWFYLGDDRL
GQGRENAKQF LNENPALADE IERLIRAHAM AAPISIVSPK EDDAVEDAGL FEE