Gene RoseRS_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3084 
Symbol 
ID5210052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3877729 
End bp3878610 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content63% 
IMG OID640596675 
Producthypothetical protein 
Protein accessionYP_001277397 
Protein GI148657192 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0630619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA CCAGCGACCA ACCACGGTTC TATCTCGGCT GCGCAGTCTG GGCGCACCCA 
TCCTGGAGCG GTGTTCTCTT CCCCCGCAAT GCGCGCAGCG CCGACTATCT GCGCCTCTAC
AGCCGACGCC TGACAACCGT TGAAGGCAAT ACCACCTTTT ACGCCACGCC GTCTGCCGAA
ACGGTACGGC GATGGGCGGA CGAAACACCG CCATCGTTCC GGTTCTGCTT CAAACTCCCG
CGCGATGTCA GTCACCAGGG ACCGCTGATG GCACGGATGC GCGAGACGGA GACGTTTGTC
CAACGCATGG CGCCGCTCGG CGAGCGACTG GGACCGTTCT TCCTGCAACT TCCGCCAGGC
TATACACCGC GCCAGATCGA CGATCTCGCC GCATGGTTGC AGGCATGGTC TCCCGCGATC
CCGCTGGCTG TCGAAGTGCG CCACAGCGAC TGGTATACCC CACAGGAAGA AGCGGCGCTC
ATGGCGTTGC TGGAACGTCA CGGCGTCGGG AGAGTGTTGA TGGATGTGCG CCCGCTCGAC
CTGGGACCGT TGCCCGGCGC GGATGACGAT CTGCGCCGCG CGCGTGACAA CAAGCCGGAT
GTGCCGCTTC ACCCGCTCCG AAGCGCATCG TTCACACTGA TACGCTACAT CGGCCATCCC
GATGTGGCAC GGAACGATCC GCTGCTCGAC GAATGGGCAG CGCGATTGCG CACGTGGATC
GCGGAAGGCA CGACCGTTTT TTTCTTTATG CACTGTCCTG TAGAACGCGA GTCGCCACTC
CTCTGTCGCG CGCTGCAACG CCGTCTTGAA GGCGCACCCG GCGTACCGCC GCTGCCGTGG
GATAGCGCAA CCGATGACGG CGAGCAACTG TCCCTGTTTT GA
 
Protein sequence
MTSTSDQPRF YLGCAVWAHP SWSGVLFPRN ARSADYLRLY SRRLTTVEGN TTFYATPSAE 
TVRRWADETP PSFRFCFKLP RDVSHQGPLM ARMRETETFV QRMAPLGERL GPFFLQLPPG
YTPRQIDDLA AWLQAWSPAI PLAVEVRHSD WYTPQEEAAL MALLERHGVG RVLMDVRPLD
LGPLPGADDD LRRARDNKPD VPLHPLRSAS FTLIRYIGHP DVARNDPLLD EWAARLRTWI
AEGTTVFFFM HCPVERESPL LCRALQRRLE GAPGVPPLPW DSATDDGEQL SLF