Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3084 |
Symbol | |
ID | 5210052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3877729 |
End bp | 3878610 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596675 |
Product | hypothetical protein |
Protein accession | YP_001277397 |
Protein GI | 148657192 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0630619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTCCA CCAGCGACCA ACCACGGTTC TATCTCGGCT GCGCAGTCTG GGCGCACCCA TCCTGGAGCG GTGTTCTCTT CCCCCGCAAT GCGCGCAGCG CCGACTATCT GCGCCTCTAC AGCCGACGCC TGACAACCGT TGAAGGCAAT ACCACCTTTT ACGCCACGCC GTCTGCCGAA ACGGTACGGC GATGGGCGGA CGAAACACCG CCATCGTTCC GGTTCTGCTT CAAACTCCCG CGCGATGTCA GTCACCAGGG ACCGCTGATG GCACGGATGC GCGAGACGGA GACGTTTGTC CAACGCATGG CGCCGCTCGG CGAGCGACTG GGACCGTTCT TCCTGCAACT TCCGCCAGGC TATACACCGC GCCAGATCGA CGATCTCGCC GCATGGTTGC AGGCATGGTC TCCCGCGATC CCGCTGGCTG TCGAAGTGCG CCACAGCGAC TGGTATACCC CACAGGAAGA AGCGGCGCTC ATGGCGTTGC TGGAACGTCA CGGCGTCGGG AGAGTGTTGA TGGATGTGCG CCCGCTCGAC CTGGGACCGT TGCCCGGCGC GGATGACGAT CTGCGCCGCG CGCGTGACAA CAAGCCGGAT GTGCCGCTTC ACCCGCTCCG AAGCGCATCG TTCACACTGA TACGCTACAT CGGCCATCCC GATGTGGCAC GGAACGATCC GCTGCTCGAC GAATGGGCAG CGCGATTGCG CACGTGGATC GCGGAAGGCA CGACCGTTTT TTTCTTTATG CACTGTCCTG TAGAACGCGA GTCGCCACTC CTCTGTCGCG CGCTGCAACG CCGTCTTGAA GGCGCACCCG GCGTACCGCC GCTGCCGTGG GATAGCGCAA CCGATGACGG CGAGCAACTG TCCCTGTTTT GA
|
Protein sequence | MTSTSDQPRF YLGCAVWAHP SWSGVLFPRN ARSADYLRLY SRRLTTVEGN TTFYATPSAE TVRRWADETP PSFRFCFKLP RDVSHQGPLM ARMRETETFV QRMAPLGERL GPFFLQLPPG YTPRQIDDLA AWLQAWSPAI PLAVEVRHSD WYTPQEEAAL MALLERHGVG RVLMDVRPLD LGPLPGADDD LRRARDNKPD VPLHPLRSAS FTLIRYIGHP DVARNDPLLD EWAARLRTWI AEGTTVFFFM HCPVERESPL LCRALQRRLE GAPGVPPLPW DSATDDGEQL SLF
|
| |