| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3082 |
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| Symbol | |
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| ID | 5210050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3874087 |
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| End bp | 3875889 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640596673 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001277395 |
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| Protein GI | 148657190 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.201317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00967911 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATAA TGTATTTCAT CTCAATGCTG CGCCCCAACA CCCACCTGTA CGATGTGGCG
CTGGATATCC ATCCCATCGA AGAACCAACC CTCGATCTGG CGCTTCCTGC CTGGACGCCA
GGATCGTACC TGATCCGCGA TTATGCGCGC CATGTACAAT CATTCGCCGT CACGGACGAT
CAGGGCGCGC CATTGCCATG GCGAAAGATC GACAAAACCA CCTGGCGTAT CGAAAACGGC
GCCGCCCGGC GCATCCGGGT CACCTATCAG GTCTATGCGT TCGAGTTGAG CGTCCGCACC
AGCCACCTCG ACAACACGCA TGGCTATTTC AATCCTTCTA ATATCTTCAT GTATCGCTGC
GGTCACGCTC ATGAACCATG CCTGGTCCAT GTCCAGACCC CTCCTGGATG GCGAATAACG
ACCGGTCTCG CACCTGCGCC GGAGCAAAAC GATGGATGGG TCACATTCCA CGCCCACGAT
TACGACGAAC TGGCTGATTC ACCGTTCGAG TGTGGCACGC ACCGCGTGCT GACGTTTGAG
GTGGACGGCA TTTCCCACGA CATTGCGCTC TGGGGACGCG GCAACGAAGA CGAGCAGCGG
ATACTGACCG ATACACGCAC CATTGTTGAA ACCACACGCG CTATGTTCGG TCGCCTGCCA
TACCGTCGCT ACGTCTTCAT CGTCCACCTG GTCGATGGCG GGTATGGCGG TCTGGAGCAT
CGTAACAGCG TATCGAATAT CGTTGATCGC TGGGGATTCC GTCCTGCACG TTCGTACGAA
AAGTTCCTGG CGCTCACTGC CCATGAGTTC TTCCACGTCT GGAATGTCAA GCGCATTCGC
CCCGCACCGC TGGGACCGTT CGACTACACC CGCGAAAACT ATACCCGTCA GTTATGGGTG
ATGGAGGGCA TCACCAGTTA CTACGATCAC CTGATCCTCC TGCGCGCCGG GTTGATCAGC
CGCGAACGCT ATCTCGAAAC GATCGCTGAC GATATCAAAC TGTTGCAGAG TCAACCGGGA
CGCGCGTTGC AGTCGCTCGA ACAGAGCAGT TTCGACGCCT GGATCAAGTT CTACCGCCCC
GATGAGAATG GACCCAACAG CAGCGTCTCG TACTATCTGA AGGGGAGCCT GGTTGCGCTC
CTGCTCGACC TGGAAATCCG ACGGCGCACC GGCGGCGCGC GTTCGCTCGA CGATGTGATG
CGCCACCTCT ATGCGGAATA TGCGGATGAC CACGTGCACG ACCTCTACAG CGGCGATCGG
GTGAAGCGCC CCGGTTTCGA TGACGACGAC GGCTTCTGCC GCGCAGTCGA AACCGTCGCT
GGCGAGGAAG ACGGCGCGTA CCGGACATTC CTGGCGCATG CAGTATCCGG CACAGGCGAG
CTTGATTATG CACGCGCCTT CGAAACAGTT GGATTGCACC TCGTGTGGGG ACATACGCTT
GAAAAAGAGA ATGATCATCT GCCAGCATGG CACGGGTTGC GTCTCAAGAC CGAGCATGGT
CGCCTCAAGG TATCGGTCGT CCTGGCGGGC GGACCCGGCG AAGCTGCCGG GATCTACGCT
GGCGACGAAC TGATTGCTCT CGATGGTGTC CGAATTGACG AAGAGCGCCT CAAGGCGCGG
ATGGCGGAGC GACAACCAGG ACAGACAGTT GTGTTCAGCC TGTTCCGGCG CGACGATCTC
CTCCACGTTC CGCTGCAGCT CGCCGAAGCG CCACCCGACA CCCTCACGAT CGCACCGGTC
GAGGCGCCAA CCGATGAGCA GACCCGCCAG CTCGAAGCAT GGTTGAAGGT GATAGCCTCC
TGA
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| Protein sequence | MTIMYFISML RPNTHLYDVA LDIHPIEEPT LDLALPAWTP GSYLIRDYAR HVQSFAVTDD
QGAPLPWRKI DKTTWRIENG AARRIRVTYQ VYAFELSVRT SHLDNTHGYF NPSNIFMYRC
GHAHEPCLVH VQTPPGWRIT TGLAPAPEQN DGWVTFHAHD YDELADSPFE CGTHRVLTFE
VDGISHDIAL WGRGNEDEQR ILTDTRTIVE TTRAMFGRLP YRRYVFIVHL VDGGYGGLEH
RNSVSNIVDR WGFRPARSYE KFLALTAHEF FHVWNVKRIR PAPLGPFDYT RENYTRQLWV
MEGITSYYDH LILLRAGLIS RERYLETIAD DIKLLQSQPG RALQSLEQSS FDAWIKFYRP
DENGPNSSVS YYLKGSLVAL LLDLEIRRRT GGARSLDDVM RHLYAEYADD HVHDLYSGDR
VKRPGFDDDD GFCRAVETVA GEEDGAYRTF LAHAVSGTGE LDYARAFETV GLHLVWGHTL
EKENDHLPAW HGLRLKTEHG RLKVSVVLAG GPGEAAGIYA GDELIALDGV RIDEERLKAR
MAERQPGQTV VFSLFRRDDL LHVPLQLAEA PPDTLTIAPV EAPTDEQTRQ LEAWLKVIAS
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