| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3020 |
|---|
| Symbol | |
|---|
| ID | 5209988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3798319 |
|---|
| End bp | 3799377 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640596612 |
|---|
| Product | transcriptional regulator-like protein |
|---|
| Protein accession | YP_001277334 |
|---|
| Protein GI | 148657129 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.117802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAAG GGTCTCGACG TGGCGGCAAT AAGCGCAGTT CTCAACTCAT CCATCGGCGG
CGTCTTTTTC TGGTGCAACG TCTCATTCGC GGATCGGCGA CGGGGCGTGT TCTGATCGCT
GATGCCAATG CCGCATTCCC TGATGTGCCT GATGGGATCT ATCCATCCGA TGCGGCGGCG
GCGCTGCGTC ACGACATTGC CGCGCTGCGC CAGGAGTATA ACTGCGATAT TCAGCGTGAA
CGGAACGGTA CATATGTGCT GGTTTCACCG GGAGACCTGA CGGTGCTCGA TCTGCCAGAC
GAAGAGATCG AAGCAGTGGC GTTCCTGATC GATGCGTATA GCGAGAGCGA TCTTCCGCTT
GCCGGGCAGA TCCGCACCTT TCTGGAGCGC GTAACGCTGC TCATGCCGGA AAAACGTCGC
AACCAGTTGC GTGAAATGAC CGCATCGCCG CGGGTTGATC GTCCGCGTGC ACCGGCGCGT
GGCGTCGATA CGATGATGAA TCTGTTGAAA GGGGTGATCA GGAAGCGTGA AATCGAGTTC
GACTACCGCT CGCCGCACAC CCCCGATGGC GCCGCACTGC ACCATCGGGT CGCCCCGCTC
GAATTCGTCT ATCGCGAGGG ACACACCTAC CTGGATGCGT TCTGTCTTCA GAGCGACGTC
CCGGCGCTCC GCGAGCGATT TGTGCTCTAC CGCCTTGATC GCATCGTTCC CAACAGTGTG
CGGCGTCTGC CGAACGCGCT GCACCGCGAC TACCGGCGAC CGACGTACAC GTTGCGCTAC
TGGCTGGCGC CAGCGGTGGC GCGCACGCGC GATGTGGCGC ACTGGTTTCC GAAAAGTGAG
ATCGCCTACG CCGACGATGG TTCGGCGGAG GTGACAGCGG TCACGAACGA TCTGTGGCGC
GCTCACCAGA TATTGATGCG CTATCGTGAG CATTGTCGCG TGATCGAACC GGCGCAACTG
GTGGATATGA TGCGCGAAAG CGTACAACGC ATGGTTGCGC TCTACGCAAC CGATGCTGAA
CAGCCTGGAG GAGAACGTGA AGTTGAATCG TTTGGGTGA
|
|---|
| Protein sequence | MGEGSRRGGN KRSSQLIHRR RLFLVQRLIR GSATGRVLIA DANAAFPDVP DGIYPSDAAA
ALRHDIAALR QEYNCDIQRE RNGTYVLVSP GDLTVLDLPD EEIEAVAFLI DAYSESDLPL
AGQIRTFLER VTLLMPEKRR NQLREMTASP RVDRPRAPAR GVDTMMNLLK GVIRKREIEF
DYRSPHTPDG AALHHRVAPL EFVYREGHTY LDAFCLQSDV PALRERFVLY RLDRIVPNSV
RRLPNALHRD YRRPTYTLRY WLAPAVARTR DVAHWFPKSE IAYADDGSAE VTAVTNDLWR
AHQILMRYRE HCRVIEPAQL VDMMRESVQR MVALYATDAE QPGGEREVES FG
|
|---|
| |