Gene RoseRS_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3016 
Symbol 
ID5209984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3795557 
End bp3796078 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content56% 
IMG OID640596608 
Productnucleic acid binding protein 
Protein accessionYP_001277330 
Protein GI148657125 
COG category[R] General function prediction only 
COG ID[COG2405] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0730966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGG TCAGTAACAC CACTGTGCTC TCAAATTTCG CAAGTGTTGG CCAGCTTGCG 
GTGCTGCGCC ACATCTTCGG TAGCGTCTAC CTGCCAGCTG AGGTATTTGC TGAAATTGAG
GATGCACAGC GTGAGGGATA CGCATTTTTC GCCGATATCG AACAGCATAT GTTCCCATTT
ACGCAAGATG GATGGCTTCA TCTTGTCAGT TTGACTGAAA CCGAGCTGCG CCTGGCTGCA
ACATTATCAG CGGGATTGCA TCGTGGTGAA CGCAGTTGCA TAGCCATCGC CCTCCAACGC
AACTGGCTGA TGCTGACCGA TGACCGGGCT GCACGCGCCG AAGCGCGGCT GCGGCAGGCG
CGGTTTTCGG GATCGATTGG CTGTCTCGTC CTTGCAGTGG AACGAGGTCT GGTTCCGCTG
GCTCAGGCAA ATGGATGGCT GGAGGCAATG ATTGCTCAGG GCTATTATGC GCCATGGACC
GACCTGAGCC TTCTCATCAA TCGCGGACCA GCGGAAACCT GA
 
Protein sequence
MSVVSNTTVL SNFASVGQLA VLRHIFGSVY LPAEVFAEIE DAQREGYAFF ADIEQHMFPF 
TQDGWLHLVS LTETELRLAA TLSAGLHRGE RSCIAIALQR NWLMLTDDRA ARAEARLRQA
RFSGSIGCLV LAVERGLVPL AQANGWLEAM IAQGYYAPWT DLSLLINRGP AET