Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3016 |
Symbol | |
ID | 5209984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3795557 |
End bp | 3796078 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596608 |
Product | nucleic acid binding protein |
Protein accession | YP_001277330 |
Protein GI | 148657125 |
COG category | [R] General function prediction only |
COG ID | [COG2405] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0730966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGG TCAGTAACAC CACTGTGCTC TCAAATTTCG CAAGTGTTGG CCAGCTTGCG GTGCTGCGCC ACATCTTCGG TAGCGTCTAC CTGCCAGCTG AGGTATTTGC TGAAATTGAG GATGCACAGC GTGAGGGATA CGCATTTTTC GCCGATATCG AACAGCATAT GTTCCCATTT ACGCAAGATG GATGGCTTCA TCTTGTCAGT TTGACTGAAA CCGAGCTGCG CCTGGCTGCA ACATTATCAG CGGGATTGCA TCGTGGTGAA CGCAGTTGCA TAGCCATCGC CCTCCAACGC AACTGGCTGA TGCTGACCGA TGACCGGGCT GCACGCGCCG AAGCGCGGCT GCGGCAGGCG CGGTTTTCGG GATCGATTGG CTGTCTCGTC CTTGCAGTGG AACGAGGTCT GGTTCCGCTG GCTCAGGCAA ATGGATGGCT GGAGGCAATG ATTGCTCAGG GCTATTATGC GCCATGGACC GACCTGAGCC TTCTCATCAA TCGCGGACCA GCGGAAACCT GA
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Protein sequence | MSVVSNTTVL SNFASVGQLA VLRHIFGSVY LPAEVFAEIE DAQREGYAFF ADIEQHMFPF TQDGWLHLVS LTETELRLAA TLSAGLHRGE RSCIAIALQR NWLMLTDDRA ARAEARLRQA RFSGSIGCLV LAVERGLVPL AQANGWLEAM IAQGYYAPWT DLSLLINRGP AET
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