| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2924 |
|---|
| Symbol | |
|---|
| ID | 5209893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3660354 |
|---|
| End bp | 3661310 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640596520 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001277242 |
|---|
| Protein GI | 148657037 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.839077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGG GACAGGAAGG AAGGGCGTTT CAGAACCCCG ATGCGCGTGG ACGTTCCGTA
TCAGTTCTGA TTGTGTTGAG TTTGATCGTG GTGGTCGCGA TTTTTCTCGG AAGCAGTTCG
GTCACGACCA TCGAGGCGGG AACGCGCGGT GTGCTGAAGA CGTTCGGTGA AATCACGGGT
GTGCTCGAAG AGGGGTTGCA TTTCCGTATG CCGTTTATCA CGTCGGTGAC GATTGTTGAG
GTACGCACCC AGCGCTATGA GTCGAACTCG AGCGCCGCTT CGCGCGACTT GCAGACAGTC
ACGACGCAGG TGGTGATCAA CTATCGCCCC GATGCAGGTC AGGTGGATCG TCTGGTGCGC
GAGATCGGCG TCGATTATGA GCGGCGGGTC GTCGATCCGG CGATCCAGGA ATCGATCAAG
GCGGCGACGG CGCGTTTTAC GGCGGAGGAG TTGATCACCC GCCGTCCTGA AGTTTCGGAG
TTGATCCAGC GCGGCTTGAG CGAGCGGTTG ACGCCGCGCG GTGTGATCGT CGAGAGTGTG
TCGATCACCG ATTTCAACTT CAGCCCGGAG TTTGCCCGCG CAATCGAGGC GAAGCAGGTT
GCCGAGCAGG ATGCGTTGCG TGCGGCGCGT GAACTGGAGC GAGCGCGGAT CGAGGCGCAG
CAGCAGGTTG CGCGCGCCGA AGCCGAAGCA AAGGCGCGCC TGGAAATTGC GCGTGCGGAA
GCTGAAGCGT TGCGCTTGCA GCGTGAGGTG ATTTCGGCGG AACTACTGCA ACTGCGCTTC
ATCGAGCGCT GGGATGGGGT GATGCCACGG TTTGTCGGCG GCGAAAACAG TCTGATGCCG
ATGCTCAGTA TTCCATCGAG CGAGGTGCTG GGCGCTTCGA CGCCGACGCC ACCGCGCACA
CCAGCGGAGG ATCAGGCGCC AGCGCCGGCA AATGAACAAC CGGCAACGTC GCCGTAG
|
|---|
| Protein sequence | MNQGQEGRAF QNPDARGRSV SVLIVLSLIV VVAIFLGSSS VTTIEAGTRG VLKTFGEITG
VLEEGLHFRM PFITSVTIVE VRTQRYESNS SAASRDLQTV TTQVVINYRP DAGQVDRLVR
EIGVDYERRV VDPAIQESIK AATARFTAEE LITRRPEVSE LIQRGLSERL TPRGVIVESV
SITDFNFSPE FARAIEAKQV AEQDALRAAR ELERARIEAQ QQVARAEAEA KARLEIARAE
AEALRLQREV ISAELLQLRF IERWDGVMPR FVGGENSLMP MLSIPSSEVL GASTPTPPRT
PAEDQAPAPA NEQPATSP
|
|---|
| |