Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2888 |
Symbol | |
ID | 5209857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3605049 |
End bp | 3606191 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596484 |
Product | hypothetical protein |
Protein accession | YP_001277206 |
Protein GI | 148657001 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATTC GTTTGTTTGT TCTGGTGACC GGCGCCGCGC TGTTGATGGT CATGGCAATG CCCGGATCGG CAGCCACGCC GGTTGGGGCG CAGACGATCA GAACCGTCAC TCCCACGCCG GTGCGGCAAC CGGACGGCGC GCCGCGTCCG ACGGCTACGC CGCTCAGCGC AACAGCGCGC GAAACGGAAC GTCTGCTTGC GGCGGCGTTG GAACGCACCG CGCAGATTGC GATCTATCAG ATGGATGTGA CCGTTCGCGC CGCCGGTGTC GTGGCGGGCG CTCGCGGGAC GCGCGAAGAG GCGCTGATCG ATTTTCGTGG CGAGTATAAT GGCGCAGATT ATGCGTTCGT TCTGCGCGCG CCAGACCTTG AGCGTCAGGG TGTCGATCCG ACCACCGGCA TCACTGCCGC GCGCGCGAAA GGTGTCACCT ATGCGCCTGG TCCACTGCCG ATCCATGGAG TGACGGAACC GGTCTGGTAT GATCTGGGGT CCGATGTGCC GTCGTTTCTG GCGCCGCCGT ACCGTCTCGA TGATATGCTG CGACGGTTGG GGAATGTTCT CCCGCTGGCG GAGATGGCGC GTGGTCGCAC CGAGACGATC GATGGGCGGC GTTGCACTGC GTACCAGTCG GGCGCGGCGG TGGCGCCAGC GGCGCTGGGA GCGTTAGGGC GACCACTCGT ACCGCCAGCA TCAACGAATG CCAGCGCACC GCTCGATCTG AACATTCAGC GCGGAACGGT GCAACTCTGG CTCTGCGACG ACGGGATGTT GCGGCGTATT CAGGCAGTTG CCGCCGGCAA CGTTCGTCAG CAACCTTCAC AGGTATTCTC GACCACGTTT CGGATCGATA TCAGCAATAT CAATGGCAAA GTGACGATTG CCGCCCCGGC ACAGGTTCGC ACCATTCAGC GCACGCCGGA GCCGATTGTC GCAGCGCAGC GCGCCGGTCC GATCCGCAGT CTACCGGGCG GCGGCAGGAT TGTGGGGCAG GTGAATGTTC AGGATGCTGT GATCATCATC GAACGCAGCG CAGATCGACG CTGGTACCGT GTGCGTGCGC CGGCTGCAAC GGGGTGGGTC AGTGTATCGC TGCTATCGGT GCCCCCGACT ATTGCGCGTC AGGTGCCGGT AGCGTCATCG TAA
|
Protein sequence | MQIRLFVLVT GAALLMVMAM PGSAATPVGA QTIRTVTPTP VRQPDGAPRP TATPLSATAR ETERLLAAAL ERTAQIAIYQ MDVTVRAAGV VAGARGTREE ALIDFRGEYN GADYAFVLRA PDLERQGVDP TTGITAARAK GVTYAPGPLP IHGVTEPVWY DLGSDVPSFL APPYRLDDML RRLGNVLPLA EMARGRTETI DGRRCTAYQS GAAVAPAALG ALGRPLVPPA STNASAPLDL NIQRGTVQLW LCDDGMLRRI QAVAAGNVRQ QPSQVFSTTF RIDISNINGK VTIAAPAQVR TIQRTPEPIV AAQRAGPIRS LPGGGRIVGQ VNVQDAVIII ERSADRRWYR VRAPAATGWV SVSLLSVPPT IARQVPVASS
|
| |