Gene RoseRS_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2888 
Symbol 
ID5209857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3605049 
End bp3606191 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID640596484 
Producthypothetical protein 
Protein accessionYP_001277206 
Protein GI148657001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTC GTTTGTTTGT TCTGGTGACC GGCGCCGCGC TGTTGATGGT CATGGCAATG 
CCCGGATCGG CAGCCACGCC GGTTGGGGCG CAGACGATCA GAACCGTCAC TCCCACGCCG
GTGCGGCAAC CGGACGGCGC GCCGCGTCCG ACGGCTACGC CGCTCAGCGC AACAGCGCGC
GAAACGGAAC GTCTGCTTGC GGCGGCGTTG GAACGCACCG CGCAGATTGC GATCTATCAG
ATGGATGTGA CCGTTCGCGC CGCCGGTGTC GTGGCGGGCG CTCGCGGGAC GCGCGAAGAG
GCGCTGATCG ATTTTCGTGG CGAGTATAAT GGCGCAGATT ATGCGTTCGT TCTGCGCGCG
CCAGACCTTG AGCGTCAGGG TGTCGATCCG ACCACCGGCA TCACTGCCGC GCGCGCGAAA
GGTGTCACCT ATGCGCCTGG TCCACTGCCG ATCCATGGAG TGACGGAACC GGTCTGGTAT
GATCTGGGGT CCGATGTGCC GTCGTTTCTG GCGCCGCCGT ACCGTCTCGA TGATATGCTG
CGACGGTTGG GGAATGTTCT CCCGCTGGCG GAGATGGCGC GTGGTCGCAC CGAGACGATC
GATGGGCGGC GTTGCACTGC GTACCAGTCG GGCGCGGCGG TGGCGCCAGC GGCGCTGGGA
GCGTTAGGGC GACCACTCGT ACCGCCAGCA TCAACGAATG CCAGCGCACC GCTCGATCTG
AACATTCAGC GCGGAACGGT GCAACTCTGG CTCTGCGACG ACGGGATGTT GCGGCGTATT
CAGGCAGTTG CCGCCGGCAA CGTTCGTCAG CAACCTTCAC AGGTATTCTC GACCACGTTT
CGGATCGATA TCAGCAATAT CAATGGCAAA GTGACGATTG CCGCCCCGGC ACAGGTTCGC
ACCATTCAGC GCACGCCGGA GCCGATTGTC GCAGCGCAGC GCGCCGGTCC GATCCGCAGT
CTACCGGGCG GCGGCAGGAT TGTGGGGCAG GTGAATGTTC AGGATGCTGT GATCATCATC
GAACGCAGCG CAGATCGACG CTGGTACCGT GTGCGTGCGC CGGCTGCAAC GGGGTGGGTC
AGTGTATCGC TGCTATCGGT GCCCCCGACT ATTGCGCGTC AGGTGCCGGT AGCGTCATCG
TAA
 
Protein sequence
MQIRLFVLVT GAALLMVMAM PGSAATPVGA QTIRTVTPTP VRQPDGAPRP TATPLSATAR 
ETERLLAAAL ERTAQIAIYQ MDVTVRAAGV VAGARGTREE ALIDFRGEYN GADYAFVLRA
PDLERQGVDP TTGITAARAK GVTYAPGPLP IHGVTEPVWY DLGSDVPSFL APPYRLDDML
RRLGNVLPLA EMARGRTETI DGRRCTAYQS GAAVAPAALG ALGRPLVPPA STNASAPLDL
NIQRGTVQLW LCDDGMLRRI QAVAAGNVRQ QPSQVFSTTF RIDISNINGK VTIAAPAQVR
TIQRTPEPIV AAQRAGPIRS LPGGGRIVGQ VNVQDAVIII ERSADRRWYR VRAPAATGWV
SVSLLSVPPT IARQVPVASS