| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2727 |
|---|
| Symbol | |
|---|
| ID | 5209696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3390165 |
|---|
| End bp | 3391178 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640596328 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001277050 |
|---|
| Protein GI | 148656845 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTA ACCTGCGCCG CCTGATCGGT TGGGAGGGGT TGCTTCTCTG CATTCTCGCG
CTCGTTGTTG TGATGAATAC GAATCTCGCG CCAGCGTACC TGAGCCTGGC AAATCAGATC
AACCTCTTCC ATCTTTCGAT TGAAAAGATC ATCGTGGCGC TGGTGATGAC GTTTGTGATC
ATCAACGGCG AGATCGATCT GTCTGTCGCT TCGGTGATGG GGTTGGCGGC ATGCCTGGTA
GCTGTGCTGT TCGAGAGCGG CACGCCGATG GCACTGGCGA TCCTGGCAGC ACTGCTCGTC
GGCGCGCTCT GCGGCGCATT CAATGGCTTC TGGGTGGCAT ACGTTGGATT GCCGTCGCTG
GCGGTGACCC TGGCTGGCAT GATTGGCTTT CGAGGTGTGG CGCGCATCCT GATCGAGGAT
CGCTCGATCG GCGGTTTCCC TGAATGGTTT ACCGCTCTGG GTCAACAACC GCTTATCGGT
CCATTTCCCT TGAGCCTGAT CCTTTTTGCC CTTCTCTTCG TCCTGGCGTT CGTGATCTTG
CAATTCTCCG GCGTCGGACG CCTGATCTAT GTGGTCGGCA ACAATGCCGC CGTGGCGCGG
TATTCGGGTA TTGATACACG ACGTCTCAAA CTGGGTATCT TCATCGCCTC CGGGTTGATC
GCGTCACTTG CTGGCGTTCT GCTGGCAGCG CGTCTCGGCG CAGTGCGCGG CAATACCGCC
GAGGGGTTCG AACTTGACAT TATCACTATG GTGTTGCTCG GCGGGGTCAG CATCTTTGGC
GGCACAGGCA ACCTGGCTGG CGTTGGTCTG GCGATCCTGG TCATTCTCAA CCTGCGCAAT
GGGATGTCGT TGCTCAATGT GACCGGCAAT GTCCAGACCG GCGTTATCGG GATGTTGCTC
ATTCTATCGG TGCTTGTTCC CAACCTGGTG CAGATGATAA GTGAACGATT GCAACGGCGC
ATAGCGCCAC GAAAGGAGGC GCCTATCGAA ACTGAGTCTT CGGTGTCTTC GTAA
|
|---|
| Protein sequence | MPTNLRRLIG WEGLLLCILA LVVVMNTNLA PAYLSLANQI NLFHLSIEKI IVALVMTFVI
INGEIDLSVA SVMGLAACLV AVLFESGTPM ALAILAALLV GALCGAFNGF WVAYVGLPSL
AVTLAGMIGF RGVARILIED RSIGGFPEWF TALGQQPLIG PFPLSLILFA LLFVLAFVIL
QFSGVGRLIY VVGNNAAVAR YSGIDTRRLK LGIFIASGLI ASLAGVLLAA RLGAVRGNTA
EGFELDIITM VLLGGVSIFG GTGNLAGVGL AILVILNLRN GMSLLNVTGN VQTGVIGMLL
ILSVLVPNLV QMISERLQRR IAPRKEAPIE TESSVSS
|
|---|
| |