Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2688 |
Symbol | |
ID | 5209657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3340975 |
End bp | 3341694 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596290 |
Product | hypothetical protein |
Protein accession | YP_001277012 |
Protein GI | 148656807 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.968577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATATG ACCCTAACCG CCACCATCGC CGATCCATCC GCCTGAAAGG GTACGATTAC ACCCAACCAG GGGCATATTT CGTCACCCTC GTCACCCACG AACGGATGCC GTTGTTCGGT GACATCGTAA ATGGCGACAT GCGGTTGAAC GACATCGGCC GCGTGGCTGA ACAATGCTGG CTGGACGTTC CATTCCATTT TCCCCATGTG GCATTGGATG CATTCGTCAT CATGCCCAAT CACATTCACG GGATTTTGTG GATTGTCGAA TCGCCGCCGG AAACGCCGGA AATGCCGGAA ATGCCGGAAA CGGTAGGGGC GAAAAATTTT TCGCCCCTAC CCCCACCATC GTCGCCACCA TCGTCACCAC CATCGTCGCC ACCATTGTCG CCACCATCGT CGCCATCATC GTTCACCAAA CGCCCCCGCG GCACCTCCAA AACCATCGGG TCTGTTGTCC GGGGGTTCAA AATCGGTGTC ACCAAATGGG TGCGGCAAAA CACTGACATA TACATCGTCT GGCAACAGAA TTATCACGAA CACATCATCC GCCACGAACG CGCCTTGAAC GCCATCCGCC GTTACATCCT GGAAAATCCC TTGCGTTGGT ATCTGGATCG CGAAAATCCG GCCTGCACCG GCCCCGATCC GCTAGCGCAA GACATTTGGG CTATGTTCAG ACAAGACGAT GCCGATCACC CCGCCGGAGG TGACCCATGA
|
Protein sequence | MPYDPNRHHR RSIRLKGYDY TQPGAYFVTL VTHERMPLFG DIVNGDMRLN DIGRVAEQCW LDVPFHFPHV ALDAFVIMPN HIHGILWIVE SPPETPEMPE MPETVGAKNF SPLPPPSSPP SSPPSSPPLS PPSSPSSFTK RPRGTSKTIG SVVRGFKIGV TKWVRQNTDI YIVWQQNYHE HIIRHERALN AIRRYILENP LRWYLDRENP ACTGPDPLAQ DIWAMFRQDD ADHPAGGDP
|
| |