Gene RoseRS_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2688 
Symbol 
ID5209657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3340975 
End bp3341694 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content56% 
IMG OID640596290 
Producthypothetical protein 
Protein accessionYP_001277012 
Protein GI148656807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.968577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATATG ACCCTAACCG CCACCATCGC CGATCCATCC GCCTGAAAGG GTACGATTAC 
ACCCAACCAG GGGCATATTT CGTCACCCTC GTCACCCACG AACGGATGCC GTTGTTCGGT
GACATCGTAA ATGGCGACAT GCGGTTGAAC GACATCGGCC GCGTGGCTGA ACAATGCTGG
CTGGACGTTC CATTCCATTT TCCCCATGTG GCATTGGATG CATTCGTCAT CATGCCCAAT
CACATTCACG GGATTTTGTG GATTGTCGAA TCGCCGCCGG AAACGCCGGA AATGCCGGAA
ATGCCGGAAA CGGTAGGGGC GAAAAATTTT TCGCCCCTAC CCCCACCATC GTCGCCACCA
TCGTCACCAC CATCGTCGCC ACCATTGTCG CCACCATCGT CGCCATCATC GTTCACCAAA
CGCCCCCGCG GCACCTCCAA AACCATCGGG TCTGTTGTCC GGGGGTTCAA AATCGGTGTC
ACCAAATGGG TGCGGCAAAA CACTGACATA TACATCGTCT GGCAACAGAA TTATCACGAA
CACATCATCC GCCACGAACG CGCCTTGAAC GCCATCCGCC GTTACATCCT GGAAAATCCC
TTGCGTTGGT ATCTGGATCG CGAAAATCCG GCCTGCACCG GCCCCGATCC GCTAGCGCAA
GACATTTGGG CTATGTTCAG ACAAGACGAT GCCGATCACC CCGCCGGAGG TGACCCATGA
 
Protein sequence
MPYDPNRHHR RSIRLKGYDY TQPGAYFVTL VTHERMPLFG DIVNGDMRLN DIGRVAEQCW 
LDVPFHFPHV ALDAFVIMPN HIHGILWIVE SPPETPEMPE MPETVGAKNF SPLPPPSSPP
SSPPSSPPLS PPSSPSSFTK RPRGTSKTIG SVVRGFKIGV TKWVRQNTDI YIVWQQNYHE
HIIRHERALN AIRRYILENP LRWYLDRENP ACTGPDPLAQ DIWAMFRQDD ADHPAGGDP