Gene RoseRS_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2676 
Symbol 
ID5209645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3323022 
End bp3324731 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content62% 
IMG OID640596278 
Productglycosyl transferase, group 1 
Protein accessionYP_001277000 
Protein GI148656795 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATC TCCTGATTAT CAGCCATGAT GTTGTTGGAC AGCGGATGGC GGGTCCGGGC 
ATCCGCGCCT GGGAAATGGC GCGGGCATTG TCATCCTGTG CGGAGATCAC GCTGATCGCG
CCATATCCCA TTGATGTGAC TGCGCCGGGG ATCCGCACCG GTCGCTTTAC CATGGGCGAC
ACCTCCTCGC TGGCGTTCTA CCTCGACCAG GCGGATGTCG TCCTGGCAAA CGGTTTTTTG
CTCGAAGCGC ACCCCGAACT TGCCGAAGCG TCCCAACCGC TCATCCTCGA TCTGTACGAT
CCGACGTTGC TCGAGAATAT CGAACTGTTC CGTCATGCAT CGCCAGTTGA ACGGGAAGAG
CGCGCCCGAC GCGACATCGA TCTGCTCAAC CGGCAACTCG CGGCTGGCGA TCTGTTCCTC
TGCGCCACCG AACGGCAACG CGATCTGTAC CTGGGCGCAC TGATGGCTGC CGGACGCATC
ACTCCTGAGC GTGTGGATGC CGACCCGCTC CTGCGCAATC TGGTTGTCGT CGTTCCTTTT
GGATTGCCTG CCAGCCCGCC GCAGCGCACC GGTCCCGGTG TGCGCGGAGT GATTCCTGGC
ATCGGCGACA ATGACCTAAT CATTCTCTGG AATAGCGGCT TGTGGGACTG GCTGGATCCG
CTGACGCTCA TTCAGGCAAT GCCGCAGGTC ATCGCCAGAG TTCCCAACGC GCGCCTGGTC
TTCATGGCGG GCAAACACCC TGGTGGCGCA GCACCGATGC GTATGACCGA CACGGCGCGC
GCCCTGGCGT CCGACCTGCA TTTGCTCGAC CGTCATATCT TCTTCTATGA GACATGGGTT
CCATATGCCG ACCGCGCGAA CCTGCTCCTT GATGCGACCG TTGCCGTCTC GTTGCATCGC
CAGCACCTCG AGATGGCATA TGCCGCCATC CGCTCGCGGG TGCTCGATTA CCTGTGGGTC
GGATTGCCTG CCGTCCTCAG CGATGGCGAC CCTGCCGCAG CACTGGCGCG GGAGCACGGC
TTTGCCCTTG TGACACCGCC GGAAGACCCG GAAGCGGTGG CGCAGGCGCT TATCACCCTG
CTCACCGACG AAGCCCGACG CGCAGAACTT GCCGACCAGG CGCGTGCACT GGCGCCACAA
TACACCTGGA CAAAGGTCGT TCGCCCGATT GTTCGATTCC TCGAAGCGGC ACCAGTGCAC
AAGCCACGCT CTGCCTCTCG TCAGCGCAGT ACCCCGGCGG CATCGTCGCC TTCGACAGCG
GAGCGCACCG ACCGCCGACA AACGCTTCAG GAACAGCGCA ATCGCGCATT ACAGGCGCTT
GAAGCAACCT GGCGTCTTGA TCAACTGACG CCACCGGCGC AGGGAGTGGC GGGAAAAGTG
CGGAACATGG CGCTGGAACG CTTTGTCTGG CCCCTGCTGG CGCCGCTGAT TGCCCGTCAG
CGCGACCACA ACGCCGCCGT GATACGTGCT GCTTATGCAA CGGCGGAGTA TCAGGATCTC
CTCTCAAACG ATGTTGCCCG CCTGATCGCC GCCGTTCGCC TGCTGGCGCA GCAAACGCGC
GACATCGCCG AACATATGGC TGGTCTGGAA GAAGCCGACC AGCACCTCCG CGCTGCGCTC
TATGGTGAAC AACCGCCGCC GCCGCCACGT ACCAGAACAC AGATGGTAGA CATTGATCGC
GAAACCCTCA TAGAGGAACG GTATGAATAG
 
Protein sequence
MMHLLIISHD VVGQRMAGPG IRAWEMARAL SSCAEITLIA PYPIDVTAPG IRTGRFTMGD 
TSSLAFYLDQ ADVVLANGFL LEAHPELAEA SQPLILDLYD PTLLENIELF RHASPVEREE
RARRDIDLLN RQLAAGDLFL CATERQRDLY LGALMAAGRI TPERVDADPL LRNLVVVVPF
GLPASPPQRT GPGVRGVIPG IGDNDLIILW NSGLWDWLDP LTLIQAMPQV IARVPNARLV
FMAGKHPGGA APMRMTDTAR ALASDLHLLD RHIFFYETWV PYADRANLLL DATVAVSLHR
QHLEMAYAAI RSRVLDYLWV GLPAVLSDGD PAAALAREHG FALVTPPEDP EAVAQALITL
LTDEARRAEL ADQARALAPQ YTWTKVVRPI VRFLEAAPVH KPRSASRQRS TPAASSPSTA
ERTDRRQTLQ EQRNRALQAL EATWRLDQLT PPAQGVAGKV RNMALERFVW PLLAPLIARQ
RDHNAAVIRA AYATAEYQDL LSNDVARLIA AVRLLAQQTR DIAEHMAGLE EADQHLRAAL
YGEQPPPPPR TRTQMVDIDR ETLIEERYE