Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2656 |
Symbol | |
ID | 5209625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3295073 |
End bp | 3297352 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596258 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001276980 |
Protein GI | 148656775 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAAT CATCATTCGC AACCACGCTT GCACTCGGCA CAGTTGTGAC CGTCTGGATC GAACCGGCAA GCACCCCAGT GGCGGTGCTC GTTCCACCGC TCATTCTGAT AACGACGCTG CAACACCTCC GCTCCTGGGA CATCGGACCC CTGATTGCCA TTGTGAGCCT CGTCTCGGTT GCGCTGACCG TTATCGGTGA AACGGCGCAC CCCTGGTTTG TCTCGACCGA CCCGCTTGCG CCGGCGATCC GTGCGGCAGC GATGATCGTC GCCGTTTCGC TGCTGGCGGC AATGCTCTGG AATTACGGCT CGCGCCTCCG CGCAACGCTG GCGCGTCTCG AAGCGGTCAA TGCCGCGTTG CGTGAAAGTG AAGCGCGCTA TCGCTCGATT GTTGAAGATC ATACGGAACT GATCTGCCGC GCCGAACCCG ATGGTACAGT GACTCTGATC AATCCCGCCG GCAGCCGCTC CTGGGGACTG AAACGCGACG AGATCATCGG CAACAACCTG CGACAGTTCA TCCATCCCGA CGATATTCCG CTGTTCAATC GCCATCTGGC GTCGCTCACG CCGGAAGCGC CTGTGCGCAT GAGCGAACTT CGCACGCTGA TGCCGGACGG CGAAATCCGC TGGCAACAGT GGACCACCCG CGCCCTCTAC AACGGCAGCC GCCTGATCGG GTATCAGGTG GTTGGACGTG ACGTGACCGA GCGCAAGCGC GCAGAAGAGC ATGTGCTTCG CAGTGAGCGA CAGTTCAAAG CCATCGCCGA AAATGCGCCA GACCTCATTA TCCGCTATGA TCTTCAGCAA CGCCATCTGT ATGTCAATCC GGCATTCGAG CAGGCGACCG GACTGACCGG CGATTCTGTC ATCGGAAAAA CGTACCGTGA CATCGGTGCG CCTGAAGATA TTGCGCACAG GCTGGATGCA TGCTTGCAGG CCGTGCTGAA GACCGGCGCC GTGCAGACCA TCGCTTTCAG CACGCCGACA CCCCTCGGGC TGCGTTTTTA CGAGGCGCGC ATTGTGCCAG AATTCGGTCC GAACGGTGAT ATCGAGTCGT TCCTTGCGAT CTTGCGCGAT ATAACCGAAC GCCGGCATCA CGAAGCGGCG ATGCAGCATC GCCAGAAACT CGAAAGCATG GGAGTAATGG CGCAGGGCAT CGCGCACGAG TTCAACAACC TGCTTGCCAT TATCCTGAAC AATGCTGAAC TGACCCTCGC AACGCTTGAT CCTCATGCAC CGGAACGCCT CTCGGTCGAA GCGATTGTCA GCGCCGGACG CCGGGCAGCC GTCATCACCC GTCAGATGCA GACCTATGTC GGGCATAACC TATTGCAGAC GACTCTGCTC AGCCTTAATG ATCTGATCGA AGAGATGAAG GAACTGCTCC AGGCGTCGGT CACCCGGAGC GTTGCACTGG TCTATCGCCT GAGCGATGCC GATCCGCTGG TGGAAGGCGA CGCAGCGCAA TTGCGCCAGG TGATCCTCAA CCTGACGATC AATGCTGCCG AGGCGATCGG TGATCGATCT GGCGAGGTGG TTATCTCTAC CGACGTTCGT TCCGTTGATC GCGCCCTCCT GGCGACAGCG ATTGGTAGCG ATGGTCTGGA AGAGGGCGCA TATGCTGTGC TGACGGTGAG TGATAACGGT TGCGGAATGG ACGCCGCAAC GCTTGAGCGG ATCTTCGATC CCTTCTTCAC GACAAAATTC ATCGGACGCG GACTGGGTCT GCCAGCTACC CTTGGCATTG TGCGTGGGCA TCGTGGCGCA ATCCGCGTGA CCAGCACACC CGGCGAAGGG ACAACAGTCA CCATCTTTCT ACCGGAGGTT CACTCGCTAT CTCCCCAGGT CGAAACGTTC ATGCCATCGT CGCGGATGTC GATCGTGCGC ACCAATTGCT CGCGCATCTT TCTGGTCGTT GATGATGAAG AAAGTACGCG CGCCGTTGCA GCGCGTATGC TGGAATGGAT GGGTCACCCG GCGCTCACAA CCGGCGATGC CGAGACAGCA GTCATTCTCG CCCGACAGCA CCGTGAGCAT CTCGCATGTG TGCTGCTCGA TCTGCCGTCC GATCACAATC TCGACCGAAC AGTTGGAGAG TTGCGACAGG TCTGCACCGA TATGCCAGTC ATCCTGATGA GCGGCTACCC GGAAGAGATT GCAAGCCGAC GGTTTGCTCA CCTCGGTTTG AGCGGTTTTC TGCAAAAACC TTTCACGTCA TACGAATTGA GAAGTGTGAT CGACACCGCG CTGGCAATGA CCGATCACCT TCCCGCCTGA
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Protein sequence | MRQSSFATTL ALGTVVTVWI EPASTPVAVL VPPLILITTL QHLRSWDIGP LIAIVSLVSV ALTVIGETAH PWFVSTDPLA PAIRAAAMIV AVSLLAAMLW NYGSRLRATL ARLEAVNAAL RESEARYRSI VEDHTELICR AEPDGTVTLI NPAGSRSWGL KRDEIIGNNL RQFIHPDDIP LFNRHLASLT PEAPVRMSEL RTLMPDGEIR WQQWTTRALY NGSRLIGYQV VGRDVTERKR AEEHVLRSER QFKAIAENAP DLIIRYDLQQ RHLYVNPAFE QATGLTGDSV IGKTYRDIGA PEDIAHRLDA CLQAVLKTGA VQTIAFSTPT PLGLRFYEAR IVPEFGPNGD IESFLAILRD ITERRHHEAA MQHRQKLESM GVMAQGIAHE FNNLLAIILN NAELTLATLD PHAPERLSVE AIVSAGRRAA VITRQMQTYV GHNLLQTTLL SLNDLIEEMK ELLQASVTRS VALVYRLSDA DPLVEGDAAQ LRQVILNLTI NAAEAIGDRS GEVVISTDVR SVDRALLATA IGSDGLEEGA YAVLTVSDNG CGMDAATLER IFDPFFTTKF IGRGLGLPAT LGIVRGHRGA IRVTSTPGEG TTVTIFLPEV HSLSPQVETF MPSSRMSIVR TNCSRIFLVV DDEESTRAVA ARMLEWMGHP ALTTGDAETA VILARQHREH LACVLLDLPS DHNLDRTVGE LRQVCTDMPV ILMSGYPEEI ASRRFAHLGL SGFLQKPFTS YELRSVIDTA LAMTDHLPA
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