| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2643 |
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| Symbol | |
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| ID | 5209612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3278938 |
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| End bp | 3280179 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596245 |
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| Product | lycopene cyclase family protein |
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| Protein accession | YP_001276967 |
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| Protein GI | 148656762 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGC ATGATGTTCT CGTCGTCGGC GCCGGTCCGA CCGGCATGGC AATCGCTGCT
GCGCTCAGCG CCACAGGACT GCGCGTGGCG GGGCTTGCGG CGGCGCCGCC GACGAAACCA
TGGCAGAATA CCTACGGCGT GTGGCTCGAT GAATTGCCGA CGCCGGAATT GCGCGACACG
CTGGGGCATC GCTGGTCGGA TGTTGTGGTG TGCGTCGGCG AGCGCACCAT TGCCCTTGAT
CGTGCGTATG GGTTGTTCGA CAACCCGCGC TTGCAGCAGT ACCTCCTCGA CCAATGCGAG
CGCCACGGTG TCACGTGGTC TGCCGGGATT GCGGCGCGCG TCGAGCATCA GGCGACGCAT
TCCCTGGTGA CCACGCGTGA TGGGCGTGTT GTTGCGGCAC GGTTGGTGGT GGATGCCAGC
GGTCATTCAC CGGCGCTGCT GCGTCGCCCT GCAACATCGC ACGTGGCGCG TCAGGCGGCG
TATGGCATCG TCGGTGTCTT CTCCGCCCCG CCGATTCAGC CGAATCGAAT GGTGCTGATG
GACTACCGCG CTGATCATCT GACCGCTGAG GAACGGCGTG AGCCGCCAAC CTTTTTGTAC
GCCATGGATC TGGGGGACGG ACAATTTTTT GTTGAGGAAA CGTCGCTGGC GCATGTGCCC
GGCTTACCGC TCACCACGCT CGAACAACGG TTGCAGCGCC GGTTGACCGC CAGAGGTGTG
ACGGTGCAGC AGGTTGTGCA TATCGAGCGG TGTCTGTTCC CGATGAATAA TCCGTTACCG
TACCTCGATC AGCCGATGAT CGGGTTTGGC GGTGCAGCGA GTATGGTGCA TCCCCCGTCG
GGGTATATGG TCGGCAAGGC GCTGCGCCGT GCCCCTGAGG TTGCGCAGGC GATTGCTCGC
GCATTAGGCG CAGCGGACGC TACCCCGCGC AGCGCTGCCC GTGCCGGATG GCGGGCGCTC
TGGTCACCGG CGCGCCTGCG TCGCAGGCAG TTGTACCTGT TCGGGCTGGC GAGCCTGATG
CGCTGCGACA GCGCAACAAT CCAGGAATTT TTCGCTCTTT TTTTCAGTCT GCCGCGTCAC
GAATGGATGG GGTATCTATC GGACACGTTG AGCACTGTCG AGTTAGCGCG CACGATGCTG
CGTCTGTTCA TCCGCGCGCC CGGAAATGTG CGCCGAACCC TGATGGCGGC TGCGGGCGCA
GAACATGCGC TGCTGCGCCG TGCGGCACTT GGTCAGGCTT GA
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| Protein sequence | MTMHDVLVVG AGPTGMAIAA ALSATGLRVA GLAAAPPTKP WQNTYGVWLD ELPTPELRDT
LGHRWSDVVV CVGERTIALD RAYGLFDNPR LQQYLLDQCE RHGVTWSAGI AARVEHQATH
SLVTTRDGRV VAARLVVDAS GHSPALLRRP ATSHVARQAA YGIVGVFSAP PIQPNRMVLM
DYRADHLTAE ERREPPTFLY AMDLGDGQFF VEETSLAHVP GLPLTTLEQR LQRRLTARGV
TVQQVVHIER CLFPMNNPLP YLDQPMIGFG GAASMVHPPS GYMVGKALRR APEVAQAIAR
ALGAADATPR SAARAGWRAL WSPARLRRRQ LYLFGLASLM RCDSATIQEF FALFFSLPRH
EWMGYLSDTL STVELARTML RLFIRAPGNV RRTLMAAAGA EHALLRRAAL GQA
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