| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2639 |
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| Symbol | |
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| ID | 5209608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3274329 |
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| End bp | 3275228 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596241 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001276963 |
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| Protein GI | 148656758 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.465483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTAA CGATACCGAC AACCTCTCCC GGCGCATTGC TGTGCGATGC ACTCACGGCT
GCACTCGGCG ACGCAACGGA AGCCTTGTGG CTGATCGCGC GCGGCGGCGT GTGGGTCGAT
GGCGTGCGTG TGCGCGATCC GGGCATGCGT CTGCCTGCGG ACGCAACCAT TGTGGTTCAG
CGCCCCCCTG ATGGGATCTA CCGCGAACCG GTCGTGACCC CGGAGATGAT CCTGTACGAA
GACGACGACC TGATTGCGCT CAACAAACCG ATAGACACCT ACGTTGAGGC GACGCCCTGG
GATGCGGAGG GGCATCTGCG CGCAGCACTG GCGCGATTCC TTGCGCTGCG CAATGGCACT
GCACCGCCGC TGCACCTGGC GCACCGCCTG GATCGGGACA CCTCCGGAGT CCTGTTGATC
TCGAAAACGC CCGATGTCAA TGCGGCGCTG CAACGCGTGT TTCGGGATGG AGCGGCGCAC
AAGACATACC TGGCGATCTG CGCCGGTTTG CCTTCTTTCG ATGAGATCGA GATTGAAACC
GGGCATGGAC GGGGGCGTGG CGGCATGTTC CGGGTGTTCC CGCCCGAAGC GATCGGGCGC
ACGCTCCCGC AGGGCGGAAC GGTTAAATCG ATGCGCACAC GCTTTCGTGT TGTTCGACGG
TTGGACGATG CCGCGCTGGT ACGCGCCTGG CCCCTCACCG GGCGTACACA CCAGATCCGG
TTGCACCTTG CCTTCCTGGG TCATCCGCTT ATCGGCGACA GCAAATATGG CGGTCTGTCC
ATCTGGCGCG GCACCCCGGC GTTCCACCAC CACCTGCACG CCGAACGCCT GGAATTGCCA
CATCCGCAGA GCGGCGCACC GCTGGTCATT GTGGCGCCAG CGCCGGAATG GGCGCAGTGA
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| Protein sequence | MPLTIPTTSP GALLCDALTA ALGDATEALW LIARGGVWVD GVRVRDPGMR LPADATIVVQ
RPPDGIYREP VVTPEMILYE DDDLIALNKP IDTYVEATPW DAEGHLRAAL ARFLALRNGT
APPLHLAHRL DRDTSGVLLI SKTPDVNAAL QRVFRDGAAH KTYLAICAGL PSFDEIEIET
GHGRGRGGMF RVFPPEAIGR TLPQGGTVKS MRTRFRVVRR LDDAALVRAW PLTGRTHQIR
LHLAFLGHPL IGDSKYGGLS IWRGTPAFHH HLHAERLELP HPQSGAPLVI VAPAPEWAQ
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