Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2626 |
Symbol | |
ID | 5209595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3256182 |
End bp | 3257402 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640596230 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001276952 |
Protein GI | 148656747 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.640199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATA TGAAACAGGG TCGGCACTGG TGGCAACAAC GGTTGACATT GCAGTTGCGC CTCGCCATAT GGACGGGTGG ACTCATCGTT ATTTGCAGTC TGAGCTTAGT ACTGTTTATC AATGTGATAG CCTCCATCGT TATCTCGAAT CGGGCGCCTG GTAATCTGCC GTCAATAGAT CCAGCAGCCA CAGACATGGC CCCACTTACT GCCATACCGT CATCACCCGC TCCCATGCCC AAGGCATCTT TGTCACCGCC TCCGCACGCA ACTCCTGCCG CTACTCGACC AGCAGATACG ACTCCGCAAG CCTTGTTGCG TGATGTACGC ATTATTTCGC TTGTCGGGTT AATATTCATC GCTTGTTTGG GTAGTGCGAG TGCCTACCTA TTGGCTGGTA TGGCGCTCCG TCCACTGCAT CAGATCAATC AGACAGTCAA GCAGATCAGT GCTGGAACAT TGGACCGACG GCTTAGACTC GATGGTCCGC ATGATGAGCT GTATGAGCTT GCAGGGGCTT TCAATGCTAT GCTTGACCGC CTAAAACAGG GATTTGAGCA GCAGGGTCGC TTTATCGCTG ATGCAGCCCA CGAATTGCGA ACGCCGCTCG CCGCCTTACG CACCTCGGTT GAGGTGGTAC AGTCCAATTC ACAGGCCACA GTGGATGAGT ATCGCGCAAT GACGGCTACT TTAGAGCGGG CGCTCATACG GCTTGAGCGA TTAGTCGGTA ACCTCCTTAT ACTCGCATCC AGTGACGAAC GCATCACGGG TGATACTGTT GAACTTGGGC CCCTCGTGGA AGAGGTGCTG TTTGATCTAC AGCCGCTTGC GGATGCACAA GACGTGACAG TGCGGCTACT GGGTGAAGCG GAAACCACGG CGCAGGGCGA TGCTACGTTG TTGTCGCACG TCTTCAGAAA CTTGATCGAA AACGCGATCC ACTACAACCG TCCTGGTGGT GAGGTCATAG TCACGCTGCA GCAGGACGAA GGTTGGGCAG TTGTGGAGGT TGCGGATACT GGGATCGGCA TTGCGACAGA GGAGCAAACC CACCTGTTTG AACGATTTTA CCGCGTGGAT CGTTCACGAT CTCGGCATTT GGGTGGTGCT GGCTTGGGAC TGTCGATAGT TGCGCACCTT GTCGAGAAGC ATGGCGGGCA CATTCAGGTC AGTAGTACGC TTGGGGTCGG CAGCCGATTC ACTGTCCGAT TACCACGGTA G
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Protein sequence | MMHMKQGRHW WQQRLTLQLR LAIWTGGLIV ICSLSLVLFI NVIASIVISN RAPGNLPSID PAATDMAPLT AIPSSPAPMP KASLSPPPHA TPAATRPADT TPQALLRDVR IISLVGLIFI ACLGSASAYL LAGMALRPLH QINQTVKQIS AGTLDRRLRL DGPHDELYEL AGAFNAMLDR LKQGFEQQGR FIADAAHELR TPLAALRTSV EVVQSNSQAT VDEYRAMTAT LERALIRLER LVGNLLILAS SDERITGDTV ELGPLVEEVL FDLQPLADAQ DVTVRLLGEA ETTAQGDATL LSHVFRNLIE NAIHYNRPGG EVIVTLQQDE GWAVVEVADT GIGIATEEQT HLFERFYRVD RSRSRHLGGA GLGLSIVAHL VEKHGGHIQV SSTLGVGSRF TVRLPR
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