Gene RoseRS_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2596 
Symbol 
ID5209565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3224222 
End bp3225784 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content64% 
IMG OID640596200 
Productcarbohydrate kinase, FGGY 
Protein accessionYP_001276922 
Protein GI148656717 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.184923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGG ACATGCCCAT CCTGGCAATT GACCTTGGCA CCTCTGGTCC CAAAGTTGCG 
CTGGTGACGG TTGCGGGCGA GATTCTGGCG TGGGAGTTCG AGCCGGTGCG ATTGACGCTG
CTTCCGAACG GCGGCGCCGA GCAGCACGCA GAGGAGTGGT GGGAGGCGAT CGGGCGGGCT
GCGCGCCGTT TGACCGCCGC CACCGGCATC ACCCGCGTTG CCGCCGTCAG TGCAACGGCA
CAGTGGTCGG GAACGGTCGC CGTCGGTGGC GACAATCAAC CACTCGCCAG TGCAATCATC
TGGATGGACT CGCGCGGTGC GCCGGATATC CGCACGCTGG TTGCCGGTCG TCCGACGATT
GCGGGGTACG GCGCCGCAAA ACTGATAACC TGGATACGTC TCACCGGCGG CGCGCCCGGT
CTTGCCGGCA AGGACCCGCT GGCGCACATC CTGTACCTGC GCCGCGCCCA TCCCGATGTG
TACCGCGCAA CCAGCGTCTT TCTCGAACCG AAGGATTATA TCAACCTGCG CCTGACCGGG
GTGCGCGCTG CGTCGTTCGA CTCGATCACC CTTCACTGGT TGACCGACAA TCGTGCAATT
GATCGGGTGG ATTATGCACC GCAACTGCTG GCGCTGACCG GCGTCGAACG GGCGAAGTTG
CCCGACCTGC GACGCGCGAT CGATATCCTC GGACCGCTGA CTGCCGACGC CGCTATGCAT
CTCGGAATCG AACCGGGCGC GCCGGTCGCG GTTGGCTCAT CGGATATTCA TTCGGCGGCG
GTGGGCGCTG GCGCAGTGCG CGACTACGAT GCCAACCTGT ACGTTGGCAC CTCATCGTGG
CTCGTCTGCC ACGTGCCGTT CAAGCGCACC GACCTGATCC ACAATATGGC ATCGCTGCCG
TCGGCAATTC CGGGAAAATA TCTGCTCACC AACGAACAGG AGTGCGCCGG CGCGTGCATC
ACCTTCCTGC GCGACAATCT GCTCTTCCCC GATGATGAGT TCACAACGTC GCGTCCTGAG
CGCTTTTATG ACCTGCTGGA TCGAATAGTG GAACGCGAAG CGCCCGGAAG CGGTGGCGTG
ATCTTCACCC CCTGGCTCTA CGGCGAACGC ACGCCGGTCG AAGATCACAC GGTGCGCGGC
GGGTTCCATA ACCTGTCGCT GACAACCACA CGCGCCCAAA TGATGCGCGC CGTGATGGAA
GGGGTCGCTT ACAATATGCG CTGGCTGCGC GACGCAGTGC AGCGCTGCCT GCGACGTCCG
CCTGGCGCGA TCATCATCAC CGGCGGCGGC GCACAGTCAG CCGTGTGGGG GCAGATCTTC
GCCGATGTGC TGGGGCGCCC GATCCATCAG GCGTCCCACC CGATCCTGGC GAATGCGCGT
GGAGCGGCGC TGATCGCAGC CGTTGCGATT GGACGACGTT CGTTCAGCGA TATTGTCGCG
CCGATCGCTG CCGTCCACCG TCCGCACCCT GAGTATACGC GCATCTACGA CGAACTGTTT
CGTGCGTTCA TTCGGATCTA TCGCCAGAAT CGGGACATTT ACGCCCGACT GAACCGGAGG
TGA
 
Protein sequence
MKPDMPILAI DLGTSGPKVA LVTVAGEILA WEFEPVRLTL LPNGGAEQHA EEWWEAIGRA 
ARRLTAATGI TRVAAVSATA QWSGTVAVGG DNQPLASAII WMDSRGAPDI RTLVAGRPTI
AGYGAAKLIT WIRLTGGAPG LAGKDPLAHI LYLRRAHPDV YRATSVFLEP KDYINLRLTG
VRAASFDSIT LHWLTDNRAI DRVDYAPQLL ALTGVERAKL PDLRRAIDIL GPLTADAAMH
LGIEPGAPVA VGSSDIHSAA VGAGAVRDYD ANLYVGTSSW LVCHVPFKRT DLIHNMASLP
SAIPGKYLLT NEQECAGACI TFLRDNLLFP DDEFTTSRPE RFYDLLDRIV EREAPGSGGV
IFTPWLYGER TPVEDHTVRG GFHNLSLTTT RAQMMRAVME GVAYNMRWLR DAVQRCLRRP
PGAIIITGGG AQSAVWGQIF ADVLGRPIHQ ASHPILANAR GAALIAAVAI GRRSFSDIVA
PIAAVHRPHP EYTRIYDELF RAFIRIYRQN RDIYARLNRR