| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2549 |
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| Symbol | |
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| ID | 5209518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3161294 |
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| End bp | 3162640 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596153 |
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| Product | peptidase M20 |
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| Protein accession | YP_001276875 |
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| Protein GI | 148656670 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.549229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.212553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT TTGATGCGCA CATCGAAGAG AACAAGGGAC GCTATTTCGA TGAACTCTGC
ACGCTGCTGC GTCAACCGTC GATTGCGGCT CAGGGTATTG GCATTGAAGA GACGGCGATG
CTGGTGGCGC AGCGGCTCGA ACGGCTTGGT GCGCAGGTGG AGATATTCCG CATGCCCGGC
GCGGCGCCGG TGGTGTACGG CAGCATTGGC GACGGCGCGC GGACGCTCCT GGTCTACGAC
CACTATGATG TTCAGCCGCC GGAACCGCTC GATCTGTGGC ATTCCCCGCC TTTTGAGCCG
ACCTTGCGCG ACGGCAAACT GTACGCGCGT GGTGTTGCGG ATAACAAGGG CAACCTGATG
CTCCGCATTC AGGCTATCGA GTCATGGCTC GCCACGCAGG GCGATCTCCC CTGCCGCATC
AACTTTCTCG TCGAAGGAGA AGAAGAGATC GGGTCGGTCA ATCTCGAGTC ATTCTGCCAG
AGCCATCCTG AACTGTTGCG CGCCGATGGG TGTCTGTGGG AAACCGGCGG AGTGAATGCG
CTTGAGCAAC CCACCATTGC GTGCGGCGCA AAGGGCATCT GCTATGTTGA ACTGGTGGTG
CGCGGTGCGG CGTATGACCT GCACTCCGCT AATGCGACCA TGGTTCCCAA CCCGGCGTGG
CGCCTGGTAT GGGCGCTGGC GACGCTCAAG GCGCCCGATG AGCGCGTGCT GATACCGGGC
TTCTACGACC GCGTGCGTCC GCCATCGGAA GCGGACATGG CGGCGCTGGC GCGCATCCCG
CTCGACGACG ATGCATTGCT GGCGGATTTC GGCATTCCGC AGTTTCTCGG CGGCTTGCGT
GGCATTGAAC GTCTGAAAGC GCATCTGTTC AATCCCACCT GCACGATCTG CGGGTTGTTT
GCCGGATACA CCGGCGAAGG ATCGAAGACG GTGCTACCCT CCGAAGCGCG CGCCAAGATC
GACTTCCGTC TCGTGCCCGA TATGGACCCG GCAGATGTGG TCACGGCGCT GCGCCAGCAT
CTCGATGCAC ATGGTTTCGA CGATATTGCG ATCATCGAGT ACGGGCACGA GAAGCCAGGG
CGATCCGATC CCGATTCGCA TATTGTTCGG GCAATGACGA CTGCCATTCG CGTGACGTAC
CACAAAGAAC CCGTCATTTA CCCCACCATG GCGGGCACCG GTCCGGTCTA CCCGGTTTGC
ACCGCTGTCG GCACGCCCAT GGCGTCGGGG TGCGGCACAG GATACCAGGG GTCTCAGGTG
CATGCGCCAG ACGAAAACAT TCGCCTGGAC GACTACTGGA CGGCAATGCG CTGCATGGGG
GCGTTCATTC AGGCATTTGC AGCATAG
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| Protein sequence | MNRFDAHIEE NKGRYFDELC TLLRQPSIAA QGIGIEETAM LVAQRLERLG AQVEIFRMPG
AAPVVYGSIG DGARTLLVYD HYDVQPPEPL DLWHSPPFEP TLRDGKLYAR GVADNKGNLM
LRIQAIESWL ATQGDLPCRI NFLVEGEEEI GSVNLESFCQ SHPELLRADG CLWETGGVNA
LEQPTIACGA KGICYVELVV RGAAYDLHSA NATMVPNPAW RLVWALATLK APDERVLIPG
FYDRVRPPSE ADMAALARIP LDDDALLADF GIPQFLGGLR GIERLKAHLF NPTCTICGLF
AGYTGEGSKT VLPSEARAKI DFRLVPDMDP ADVVTALRQH LDAHGFDDIA IIEYGHEKPG
RSDPDSHIVR AMTTAIRVTY HKEPVIYPTM AGTGPVYPVC TAVGTPMASG CGTGYQGSQV
HAPDENIRLD DYWTAMRCMG AFIQAFAA
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