Gene RoseRS_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2510 
Symbol 
ID5209479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3103812 
End bp3104849 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content63% 
IMG OID640596115 
Productglycosyl transferase, group 1 
Protein accessionYP_001276837 
Protein GI148656632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.568348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.819187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC GCATTGTAAT CTGCACGGCG CAGGTGCCGT TTGCGCGTGG CGGCGCTGAA 
CTGCTGGTCG ATGGATTGCG GGATGCCCTT CAGGCGCGCG GTCATCTGGT GGATGTGGTT
GCGCTCCCCT ATGCCTGGCA ACCGCACGAA CGCCTCATCC CATCGGCGCT GGCGTGGCGT
CTCCTCGATC TCGAGCATGT CAACGGCGTG CCGGTCGATC AGATCATCTG CACCAAATTC
CCATCGTATG CGGCGCGCCA TCCGCGCAAG GTCGTCTGGC TGGTTCATCA GCATCGTCAG
GCATACGACT GGTACGGCAC ACCGCTCTCC GATTTCGCCA ATACTCCGGA AGACCGTGCA
ATCCGCGATC AACTGCTGCG AATGGACCGC ACGACGCTGA GTGAGGCGCA GCGGCTGTTC
GCCATTTCAC GGAATGTCGC AACGCGCCTC AAGCGGTTCA TTGGTCTGGA CGCGCAACCG
CTCTACCCGC CAAGCCGGTA TGTCGGGCGT CTGCGATCTG GTCCGTATGG CGATTACCTC
CTTTCCGATG CGCGTCTCGA TGCTGCCAAA CGCCTCGATC TGCTCCTCCG GGCGCTTGCC
CGCACCAGGC TTCCCGTGCG CTGCGTGTTC ATCGGCGCCG GTGAGGAGCG CGCACGGCTG
GAACGCCTGG CATCCGACCT GCGCCTGGGT TCACGCGTCG AGTTTCGCGG TTTTGTGCCC
GATGACGAAT TGATCGACCT GTATGCCTCG GCGCGCGCCG TCTACTATGC GCCGTTCGAT
GAAGACTACG GGTTCACTGC GGTTCAGGCG CTGGCTGCCG CACGCCCGGT GATCACTGCC
AGTGATGCAG GCGGCGTGCT GGAGTTTGTC GACCATGGCG TCACAGGGCT GGTCGCCCCG
CCGGATCCCG ATGCGCTTGC GGCGCATATC GATGCGCTGT TCGAGGATGT TGCACGTGCA
GAACGCCTCG GCGCCGCCGG ACCGGCGCGC GTGGCGGATA TTTCATGGGA TCGGGTTCTT
CAGGCATTAG TGTTGTAA
 
Protein sequence
MPKRIVICTA QVPFARGGAE LLVDGLRDAL QARGHLVDVV ALPYAWQPHE RLIPSALAWR 
LLDLEHVNGV PVDQIICTKF PSYAARHPRK VVWLVHQHRQ AYDWYGTPLS DFANTPEDRA
IRDQLLRMDR TTLSEAQRLF AISRNVATRL KRFIGLDAQP LYPPSRYVGR LRSGPYGDYL
LSDARLDAAK RLDLLLRALA RTRLPVRCVF IGAGEERARL ERLASDLRLG SRVEFRGFVP
DDELIDLYAS ARAVYYAPFD EDYGFTAVQA LAAARPVITA SDAGGVLEFV DHGVTGLVAP
PDPDALAAHI DALFEDVARA ERLGAAGPAR VADISWDRVL QALVL