Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2451 |
Symbol | |
ID | 5209420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3028958 |
End bp | 3032566 |
Gene Length | 3609 bp |
Protein Length | 1202 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596056 |
Product | peptidase C1A, papain |
Protein accession | YP_001276778 |
Protein GI | 148656573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4870] Cysteine protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.692064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCG TCGCTCACTT CCGCAGACTG GCAGGCATGC TCACCTTCCT GAGCATCTCC CTCGCGCTAC TCGTTCTTCC ATCGCTGGTG CAATCATCGT CGCACGATGT CATCGTCACG CTGGATCATG ATGGAACCAG GATTACCCTG ACCGATGGGC AACGCCTGAT CGTCAAACTG GAGGGACATC CCGCAACCGG CTACGTTTGG GATAGTGAAC AATCGTCGTC GTTATTGCAA CCGCTGGGCG ACCCGGTATT CGAGGCGCCG TCTCCGACGG GAGGGGAAAC GGGCGCACCG GCATTGCAGG TGTTGACGTT CCTGCCGGTA CGCGCCGGGG AAGAGACGCT CACCCTGGTC TACCGCCGAC CGTGGGATCG CGCTGTTCAG CGCACCTTCA GCATTCGGGT CGAAACCCTC GGTCGCTTCA CCGTCCTGTC GCCTGCGGCG CAACCGTCAT CCGGTTCCAC ACCTCCACCG GTGGTGATGG GGGCACAGGA GGGTTTGCCC GCAGCCTTCA ACTGGTGTGA TCAGGGCGCC TGCACGCCGG TGAAAGATCA GGGGGTATGC GGATCCTGCT GGGCATTCGC CACGACGGGG GTGGTCGAGT CCGCGCTCAA GCGCATCGAT GGCGTCGAAC GCGATCTGTC GGAGCAGTAC CTGATCTCGG CGGGAACACA CGGTACGTGT AATGGAGGGG GACCGGCATA TGACCTGTTC ATCGGTGATC TTCCAGCGCA TCAAACAGAG GCGGGCGCCG TCTATGAAAG CGACCTTCCG TACCTTGGTC AGGATGTGCC GCTCACCCGC GCACTGCCCC ACCACGAACG TCTCCTGGCG TGGAACCAGG TCTTCAATGC CGACATCGCT ACCATCAAGC GCATCATCTA TGAGCACGGT CCGGTGTCCG CCTATGTCTG CGCGGGTTCG CGCTTTATGT GGTACCGATC AGGAGTCTTC GAGACCGATG AGTCAGCCGC ATGCAACGGA GGCATCAACC ATGCAGTGGT GCTGGTGGGA TGGGACGATA GCAGAGGCAG TCGGGGCGCG TGGCGTCTGC GCAACTCGTG GGGCAGCATG TGGGGTGAAG GCGGATATAT GTGGATCGGC TACGGGGTGT CGGGTATCGG TCGACGGATC GACTATGCGT ACTATGATCG CCTGGCGCCG GGCACGTCCG CGATTTCGGG ACAGGTAACG TCGCTGGGGA GTGGCATAGC GAATGTTGTG GTGTCTGATG GCGTCCGGAG TGCATTCACC GATCAGTATG GCATGTACGT TGTGAAGCAT GTTCCTCCGG GCACATATAC CCTCACTCCA TCGCGCAGCA GTCTCGTCTT TTCTCCATCC AGCCGCACGG TGACTATCAA CGCGGGCAGA AATCTGAATC GGCAGGACTT TGCGATCCTT CCAACCTACA CCGTCAGCGG GCAGGTGACC GATGGCGCAG GGAACGGCAT CGCAGGCGTG ACCATCTCTG ATGGAACGCG CAGCGCCACA ACTGATGCCC AGGGGCGCTA TGCTCTGACG AATGTGCCGC AAGGCGGGTA TTGGCTCACT CCATCCCACA ATACCTATGT GTTCAATCCG ACTCAACGCT GGATCACGGT TAATGGCGAT CTCAACGGGC AGGATTTTGT CGCAACCTGT CTCTCCTGCA CCATCAGCGG GCGGGTGACC GATGGCGCCG GAAACGGCAT CGCAGGCGTT ACCATCTCTA ATGGGACGCG CAGCGCCACG ACCGATGCCC AGGGGCGCTA TGCCTTGAAC GTACCGCCGG GCGAGTATTG GCTCGTGCCG TCTCGCAACG GCTACACGTT CAATCCAGAG CGGCGCCGGA TTACAGTCAA CCGCCATCTG AGCGGGCAGG ATTTCACGGC GACCCTTGCG ACCTATGTCA TTCGCGGGCG GGTGACCGAT AGCGCAGGGA ACGGCATCGC AGGCGTGACC ATCTCCGATG GAACGCGCAG CGCCACGACC GATGCCCAGG GGCGCTATGC TCTGACGAAT GTGCCGCAAG GCGGGTATTG GCTCACTCCA TCCCACAATA CCTATGTGTT CAATCCGACT CAACGCTGGA TCACGGTTAA TGGCGATCTC AACGGACAGG ATTTCACGGC GACCCTCGTG ACCTATGTCA TTCGCGGGCG GGTGACCGAT AGCACAGGGA ACGGCATCGC AGGCGTGACC ATCTCTGATG GAACGCGCAG CGCCACAACT GATGCCCAGG GGCGCTATGC TCTGACGAAT GTGCCGCAAG GCGGGTATTG GCTCACTCCA TCCCACAATA CCTATGTGTT CAATCCGACT CAACGCTGGA TCACGGTTAA TGGCGATCTC AACGGACAGG ATTTCACGGC GACCCTCGTG ACCTATGTCA TTCGCGGGCG GGTGACCGAT AGCACAGGGA ACGGCATCGC AGGCGTGACC ATCTCTGATG GAACGCGCAG CGCCACAACT GATGCCCAGG GGCGCTATGC TCTGACGAAT GTGCCGCAAG GCGGGTATTG GCTCACTCCA TCCCACAATA CCTATGTGTT CAATCCGACT CAACGCTGGA TCACGGTTAA TGGCGATCTC AACGGGCAGG ATTTTGTCGC AACCTGTCTC TCCTGCACCA TCAGCGGGCG GGTGACCGAT AGCGCCGGAA ACGGCATCGC AGGCGTTACC ATCTCTAATG GGACGCGCAG CGCCACGACC GATGCCCAGG GGCGCTATGC CTTGAACGTA CCGCCGGGCG AGTATTGGCT CGTGCCGTCT CGCAACGGCT ACACGTTCAA TCCAGAGCGG CGCCGGATTA CAGTCAACCG CCATCTGAGC GGGCAGGATT TCACGGCGAC CCTTGCGACC TATGTCATTC GCGGGCGGGT GACCGATAGC GCCGGAAACG GCATCGCAGG CGTGACCATC TCCGATGGAA CGCGCAGCGC CACGACCGAT GCGCAGGGCT TCTACGCGCT GAGCGGCGTC CCGGCGGGCG CATACACGCT CACTCCATCC CGCGACGGGT ACGCTTTCGC GCCCGCCTCG CGCACCGTGA CGGTCACCGG CGAAGTGAGC GGGCAGGATT TCACGGCGAC CCTCGTGACC TACGCGATTC GCGGGCGGGT AACCGACGGC GCGGGGAACG GCGTGGCAGG GGTGACCATC TCTGACGGCA CGCGCAGCGC CACGACCGAT GCGCAGGGCT TCTACGCGCT GAGCGGCGTC CCAGCGGGCG CATACACGCT CACTCCATCC CGCGACGGGT ACGCCTTTGC GCCCGCCTCG CGCACTGTGA CGGTCACCGG CGACCTGAGC GGGCAGGATT TCACGGCGAC CCTCGTGACC TACGCGATTC GCGGGCGGGT AACCGACGGC GCGGGGAACG GCGTGGCAGG GGTGACCATC TCTGACGGCA CGCGCAGCGC CACGACCGAT GCGCAGGGCT TCTACGCGCT GAGCGGCGTC CCGGCGGGCG CATACACGCT TACCCCTTCG CTTGACGGGT ACGCCTTCGC GCCCGCCTCG CGCACCGTGA CGGTCGCTGG CGATCTGAGC GGGCAGGATT TCACGGTCTC TTCTTCAGCC GGGCAGTACC GGGTATTCCT GCCGCTGACC GTTCGCTAG
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Protein sequence | MLVVAHFRRL AGMLTFLSIS LALLVLPSLV QSSSHDVIVT LDHDGTRITL TDGQRLIVKL EGHPATGYVW DSEQSSSLLQ PLGDPVFEAP SPTGGETGAP ALQVLTFLPV RAGEETLTLV YRRPWDRAVQ RTFSIRVETL GRFTVLSPAA QPSSGSTPPP VVMGAQEGLP AAFNWCDQGA CTPVKDQGVC GSCWAFATTG VVESALKRID GVERDLSEQY LISAGTHGTC NGGGPAYDLF IGDLPAHQTE AGAVYESDLP YLGQDVPLTR ALPHHERLLA WNQVFNADIA TIKRIIYEHG PVSAYVCAGS RFMWYRSGVF ETDESAACNG GINHAVVLVG WDDSRGSRGA WRLRNSWGSM WGEGGYMWIG YGVSGIGRRI DYAYYDRLAP GTSAISGQVT SLGSGIANVV VSDGVRSAFT DQYGMYVVKH VPPGTYTLTP SRSSLVFSPS SRTVTINAGR NLNRQDFAIL PTYTVSGQVT DGAGNGIAGV TISDGTRSAT TDAQGRYALT NVPQGGYWLT PSHNTYVFNP TQRWITVNGD LNGQDFVATC LSCTISGRVT DGAGNGIAGV TISNGTRSAT TDAQGRYALN VPPGEYWLVP SRNGYTFNPE RRRITVNRHL SGQDFTATLA TYVIRGRVTD SAGNGIAGVT ISDGTRSATT DAQGRYALTN VPQGGYWLTP SHNTYVFNPT QRWITVNGDL NGQDFTATLV TYVIRGRVTD STGNGIAGVT ISDGTRSATT DAQGRYALTN VPQGGYWLTP SHNTYVFNPT QRWITVNGDL NGQDFTATLV TYVIRGRVTD STGNGIAGVT ISDGTRSATT DAQGRYALTN VPQGGYWLTP SHNTYVFNPT QRWITVNGDL NGQDFVATCL SCTISGRVTD SAGNGIAGVT ISNGTRSATT DAQGRYALNV PPGEYWLVPS RNGYTFNPER RRITVNRHLS GQDFTATLAT YVIRGRVTDS AGNGIAGVTI SDGTRSATTD AQGFYALSGV PAGAYTLTPS RDGYAFAPAS RTVTVTGEVS GQDFTATLVT YAIRGRVTDG AGNGVAGVTI SDGTRSATTD AQGFYALSGV PAGAYTLTPS RDGYAFAPAS RTVTVTGDLS GQDFTATLVT YAIRGRVTDG AGNGVAGVTI SDGTRSATTD AQGFYALSGV PAGAYTLTPS LDGYAFAPAS RTVTVAGDLS GQDFTVSSSA GQYRVFLPLT VR
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