Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2407 |
Symbol | |
ID | 5209376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2978756 |
End bp | 2979418 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596012 |
Product | TrkA domain-containing protein |
Protein accession | YP_001276734 |
Protein GI | 148656529 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.163912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGA TTATTGTCGG CGGCGGCAAA ATCGGGCGCA ACCTGGCAAT GTTTCTGACG GCTGAAGGGC GTCACGCGAT CACATTGGTC GAAAAACAGG AACAGGTGGC GCATTCGCTG ATGCGCATGC TCCCCGATAT CCGGGTGATC GAAGGGGATG GGTGTGATCC TTCGGTGCTG CGCGATGCGG GCGCGGAGTT TGCCGATGCA GTTGCAGCGG TCACCGGCGA CGACGAGGAT AATCTGGTCA TCGCGGTGCT GTGCAAGCGC GAGTTCCGCG TGGGTCGCGT TGCAGCACGG ATCAATAATC CAAAGAACGC CTGGCTGTTC ACCCGCCGCA TGGGGGTTGA CCTGCCGATC GATACGGCGC AGACGATCGG ACGCGGGCTG GAGGCGGATA TCAATCTCGG GGCGATTGTT CAGTTGACCC GCCTGCGTGA GGGGCGAATC TCACTCATCG AGTTTACCGT TTCCGCTGAG TCGAGCGCGG TCGGAAAGAA TGTTGCGTCG CTGCATTTGC CCCCCGATTG TCTGCTGACC GCGATCCTGC GCGGTGACGA CGTCATTCTG CCGTCAGGCG AAACCGTCAT CCAGGCGGGG GATCAGGTGA TTGCCCTGGC ATATCGTGAC CGCGAGGCGG CGCTGTCGGA GCGGTTCCAG TAA
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Protein sequence | MNVIIVGGGK IGRNLAMFLT AEGRHAITLV EKQEQVAHSL MRMLPDIRVI EGDGCDPSVL RDAGAEFADA VAAVTGDDED NLVIAVLCKR EFRVGRVAAR INNPKNAWLF TRRMGVDLPI DTAQTIGRGL EADINLGAIV QLTRLREGRI SLIEFTVSAE SSAVGKNVAS LHLPPDCLLT AILRGDDVIL PSGETVIQAG DQVIALAYRD REAALSERFQ
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