Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2401 |
Symbol | |
ID | 5209370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2971726 |
End bp | 2972565 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640596006 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001276728 |
Protein GI | 148656523 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC CTCTGATTAT GATTGTCGGC GCTGCCGATA CAGGGCGCGC ACCACTGACC GCCGCGCTCC TTCGACGCAT GCTGCTGCAA CGCACTATCG ATGTGCGCGT TGAGTCGGCG GGGGTGCTGG GGCACGATGA CGATCCGGCG AGTCCCGACG CACTCGCGGT TGCCGAACAC CTGTCGCTCG ACCTCAGCGC CCACCGCGCG CGCAGTCTGA GCGCCGACCT GGTTGACGCC GCATCGTTGC TGCTGGCAGT TGATCGCGGA ACTGCTCGGG TTGCACGTCT GCGTTTTCCA CAGGCTGAAG CGCGCATCCA TACCCTGGGC GAACTCGCCG GACGTGACCG GGATATTCCC GATCCATTCA AGATGCAGAT CGGTCCCTGG TTGATCTACG CGCAGGAGAT CGAACGTCTG CTCCAGCAGG CGCTTCCGCG TATCATTGCC TTTCTCCCGC AAGTCCTGAC TGCCCCGCCA GACAGCAAAC CTCCTGCACC GTTGCCGGTT GTGGCGGAAG AACGGCGCGC GGCGGCTGAA CGCACGGCCC AACTCCTCGA TCTGATGACG CGCATTCCCG GTATTGTCGA GTGGAGCGCG GCGCGCGAAC AGATTGAGAT CACGATTGCG CTCGCTCAGG CGCGTCAAGC CGGAGCATCC GATCTGGTCG CCGCATACGG GGCGCTGTTG CGCGCCGCGC TCGCGCTGAC GCCGCCTGTG CCGGGCACGG CGCATCTGGC AGCTCTGCGC GATGCCATCG CACGGCTCGA ACAACCTATC ACGTCAGAGG ATGTCGGCAG TCTGTCAGCG CGTCTCGGCG CGTGGTCGAC CCTGGCGTGA
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Protein sequence | MNTPLIMIVG AADTGRAPLT AALLRRMLLQ RTIDVRVESA GVLGHDDDPA SPDALAVAEH LSLDLSAHRA RSLSADLVDA ASLLLAVDRG TARVARLRFP QAEARIHTLG ELAGRDRDIP DPFKMQIGPW LIYAQEIERL LQQALPRIIA FLPQVLTAPP DSKPPAPLPV VAEERRAAAE RTAQLLDLMT RIPGIVEWSA AREQIEITIA LAQARQAGAS DLVAAYGALL RAALALTPPV PGTAHLAALR DAIARLEQPI TSEDVGSLSA RLGAWSTLA
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