Gene RoseRS_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2401 
Symbol 
ID5209370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2971726 
End bp2972565 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID640596006 
Productprotein tyrosine phosphatase 
Protein accessionYP_001276728 
Protein GI148656523 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC CTCTGATTAT GATTGTCGGC GCTGCCGATA CAGGGCGCGC ACCACTGACC 
GCCGCGCTCC TTCGACGCAT GCTGCTGCAA CGCACTATCG ATGTGCGCGT TGAGTCGGCG
GGGGTGCTGG GGCACGATGA CGATCCGGCG AGTCCCGACG CACTCGCGGT TGCCGAACAC
CTGTCGCTCG ACCTCAGCGC CCACCGCGCG CGCAGTCTGA GCGCCGACCT GGTTGACGCC
GCATCGTTGC TGCTGGCAGT TGATCGCGGA ACTGCTCGGG TTGCACGTCT GCGTTTTCCA
CAGGCTGAAG CGCGCATCCA TACCCTGGGC GAACTCGCCG GACGTGACCG GGATATTCCC
GATCCATTCA AGATGCAGAT CGGTCCCTGG TTGATCTACG CGCAGGAGAT CGAACGTCTG
CTCCAGCAGG CGCTTCCGCG TATCATTGCC TTTCTCCCGC AAGTCCTGAC TGCCCCGCCA
GACAGCAAAC CTCCTGCACC GTTGCCGGTT GTGGCGGAAG AACGGCGCGC GGCGGCTGAA
CGCACGGCCC AACTCCTCGA TCTGATGACG CGCATTCCCG GTATTGTCGA GTGGAGCGCG
GCGCGCGAAC AGATTGAGAT CACGATTGCG CTCGCTCAGG CGCGTCAAGC CGGAGCATCC
GATCTGGTCG CCGCATACGG GGCGCTGTTG CGCGCCGCGC TCGCGCTGAC GCCGCCTGTG
CCGGGCACGG CGCATCTGGC AGCTCTGCGC GATGCCATCG CACGGCTCGA ACAACCTATC
ACGTCAGAGG ATGTCGGCAG TCTGTCAGCG CGTCTCGGCG CGTGGTCGAC CCTGGCGTGA
 
Protein sequence
MNTPLIMIVG AADTGRAPLT AALLRRMLLQ RTIDVRVESA GVLGHDDDPA SPDALAVAEH 
LSLDLSAHRA RSLSADLVDA ASLLLAVDRG TARVARLRFP QAEARIHTLG ELAGRDRDIP
DPFKMQIGPW LIYAQEIERL LQQALPRIIA FLPQVLTAPP DSKPPAPLPV VAEERRAAAE
RTAQLLDLMT RIPGIVEWSA AREQIEITIA LAQARQAGAS DLVAAYGALL RAALALTPPV
PGTAHLAALR DAIARLEQPI TSEDVGSLSA RLGAWSTLA