| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2393 |
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| Symbol | |
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| ID | 5209362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2960168 |
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| End bp | 2962147 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595998 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001276720 |
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| Protein GI | 148656515 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAC GCAGATGGTT TCGGATGGCT CTTGCCATAG TGGTGATGAT TATGGGAGTG
TCTATCGTCG TCACAGCGTC GTACCGTTCC TCGCCAGCGT ATGCTGGCGC TTCCGGTGCG
CCGCCTGCAT CGTGTTCTGC GCCGATCGCT CCGGTGACGC TCGTCAATCC CGCCGTTCTC
ACCACCTGTA CCCAGGCAGC GCTCCAGGCG GCGCTGACAA ATGGCGGGCA CATCACCTTT
GATTGCGGAC CCAACCCGGT CACGATTCCA ATCACATCGC CGCTGGTCAC GTCCGCCACC
CGCGATATTG TGATCGATGG GAAAGGGTTG ATCACCCTCG ATGGCGGCGG CGTTACCCGT
ATTCTGGAAA AACCATTTAC TCCCGGCTCG CATATCGACA AAACCTCCGG CAATGACCTG
GTGATCCAGA ACATGCGCTT CATCAATGGG CGCGCACCGG CTGCCACGAG GACCCAGGAC
GACAAAGCGC GCGGTGGAGC AATCTGGGTG ACGAGTCCGG GGACGCGCCT GCACATCATC
AATTCGGTCT TCGAGAATAA TCGCACCACC AGCATCACTG ATGAAGACAA TCAAGGCGGG
GCGATCTATG CTGGCAATAT CTACGAAACG ATTATTGTCG GTTCGGTCTT TATCAATAAC
GAAGCGGGCA ATGGCGGTGC GTTCGGCGGT ATTGCCACGG GATTGCAGGT GTTCAACTCG
CGCTTCGGCA ACAACCGCGC CTCCGACTCG ACGCCGGGCG GCATTGTGCG CGGGCATGGC
GGCGCCCTGC ACCTCGATGG CGTCAGCAAC GATTTCAACC CGATCACCAG CAATACCGTC
GATATCTGCG GCAGCATCTT TGAGGACAAC AGCGCCACAC GCGGCGGCGG CGCCATCAAG
GTGACGATCT CTGACAATCT CAATACCAAA GCCACCTATG CGCGCTCGAC ATTCACCGGG
AATCGGGTGC TCGATGCACC GCCAGCCGAA GGGCACGGCG GCGCTATCTA TCATATCGAA
GACGATTGGG CAGGCGGAAG CAACGAAGAT AACATCGAGA TCCGCGAGTC GACCTTCAAC
GGCAACTATG CGCCAAAACA GGGGGGTGGC GTCTGGATGA CGCTCAATGG GCGCGGACGG
GTGATCAACT CGACCTTCTT CAGCAATCGT GCAGCGACCG CCGGAACAAA TATCGTCGGT
CAGGGCGGCG GGTTGATCAT CAGTCGGGGA ACGATTGACA TCAGTCACGT CACATTTGCA
AAGAACTTTG CAACCTTTCA GGGCGGAGCG GTCTTTGCCA GCAACCAGGC ATCAGTGACC
CTGATCGGTT CGATCTTCTA CGACAACCGT CTCGATCCGA CCCACACCAA CCCGGTGACT
ACCGAGTATC AGGGGTACCA TACGAACCGA CCGCTGACCA ACGGCGGCGG CAACATTCAA
TTCCCACGCA CGAAGGCGCC CGATTTCAAC AACGATATCA ATAACCTGAT CACGTCACCC
GCGTCCGCCA TTCTCTTTCA GGACCCGCAA CTCGCGCCGC TGGCAAACAA CGGCGGTCCC
ACACCGACAA TGGCGATTGC CGCATCGAGT CCGGCGGTCA ACCACGCCGC AGCGGCAACC
TGTCCCTCAA TCGATCAGCG CGGCGTCAGC AGGCCGCAGG GGAGTGGGTG CGATGCAGGC
GCGTATGAAC TCGTGCTCGC GCTCTCCCTT CTTCCGCCGT TTGTGGGTGT GGGTGAAGCC
GGAACGGTAT TGACCGTCTA CGGCGCAGAT TTCAACGCGA GCAGCAAGAT CGTGATCGAC
GGCGTCGAGC GTCCAACGAC GTTCGTGAGC GCGATGGAGT TGCGCACCGT ATTGACTGCT
GCCGATGTGG CGACCGTCAC CAATCGGGAA GTGCAGGTCA ATACGTCGAC ACTGCCGCCG
GTGATCCTGC GTGTCATCGA ACAGGTGTAT CGTGTGTATC TGCCGCTCAC CCGTCGCTAG
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| Protein sequence | MHPRRWFRMA LAIVVMIMGV SIVVTASYRS SPAYAGASGA PPASCSAPIA PVTLVNPAVL
TTCTQAALQA ALTNGGHITF DCGPNPVTIP ITSPLVTSAT RDIVIDGKGL ITLDGGGVTR
ILEKPFTPGS HIDKTSGNDL VIQNMRFING RAPAATRTQD DKARGGAIWV TSPGTRLHII
NSVFENNRTT SITDEDNQGG AIYAGNIYET IIVGSVFINN EAGNGGAFGG IATGLQVFNS
RFGNNRASDS TPGGIVRGHG GALHLDGVSN DFNPITSNTV DICGSIFEDN SATRGGGAIK
VTISDNLNTK ATYARSTFTG NRVLDAPPAE GHGGAIYHIE DDWAGGSNED NIEIRESTFN
GNYAPKQGGG VWMTLNGRGR VINSTFFSNR AATAGTNIVG QGGGLIISRG TIDISHVTFA
KNFATFQGGA VFASNQASVT LIGSIFYDNR LDPTHTNPVT TEYQGYHTNR PLTNGGGNIQ
FPRTKAPDFN NDINNLITSP ASAILFQDPQ LAPLANNGGP TPTMAIAASS PAVNHAAAAT
CPSIDQRGVS RPQGSGCDAG AYELVLALSL LPPFVGVGEA GTVLTVYGAD FNASSKIVID
GVERPTTFVS AMELRTVLTA ADVATVTNRE VQVNTSTLPP VILRVIEQVY RVYLPLTRR
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