| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2317 |
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| Symbol | |
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| ID | 5209284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2866624 |
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| End bp | 2869467 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640595922 |
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| Product | hypothetical protein |
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| Protein accession | YP_001276646 |
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| Protein GI | 148656441 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA TACTGGCAAC TTTCTCTGTG CTCACTGCTG CGCTTAAGCG TCTGCGCGCC
AATCTCGCAC TGACGTTGTG CGCATGGCTG GCAGCCGTCA CTGCTGTCGC GCTGGCGTCC
GCCATTCCGG CATATGCCGA AGCCGCCAAT CTGCGCCTGT TGCGGGATGA AATCCGGCAG
CAGGAGGAAC GTGCGGGGCG GTCGCCGTTT GCGCTCCTGT TCCGCTATGT TGGCGCGTGG
AACACGCCGC TGGAATGGGA ACGGGTCGCG CCAGCCGACG ACTATTTGCG CCGTGAGGGG
ATACCAGGTC TCGATCTGCC GATCGACAGT TTTGCGCGCC ATGCCCGCAC CGCGCCGCTA
CGTCTGTTTC TTGCTTCTGG AGGCGAAACC GTCTTCCTCA AGAACGCGCC GCTCGGTTTT
ATCAGCGGTC TTGATGATCG GTTCCGCATC GTCGATGGGC GGATGCCGCA ACCGGCGGGG
AACGCTACGG CGCTGGACGT CATGATCTCG CGCGCATTCG CCGATGAAGT CGGGTTGAAT
GTTGGCGATG CACTGACGAT CGTTGCAGGC GGAGCGCGCC CGGCGACGTT GCAGGCGCGG
GTGGCTGCGA TCTGGGAACC GATCAATCAG AATGATCCGG CGTGGTTCTT CCCGCCCCAA
ACGCTCAGCG ATGTCATCCT TATGGCAGAA GAGAGTTTCA CCGGTCCTGT TGCCGAAGCG
CTGCGCAACG ACGTCGATCA GGCGCTCTGG TTTGTGCGGT TGGGCAGCGA AGGGATAACA
GGAGCGCAGG CGACCCCCCT GTTGAGCCGG ATTGAAACGG TTCGCGCCCG TGTTGCCGGT
GTTCTCCCCG GATCACGTCT TGAGCAGGGA CCGGCAGAGG TGTTGCAGCG GTATCAGTCG
CGTGTATCCA CGCTGACGAC GCAACTGTTC GTGTTCAGTA CGCCGATTCT GGCGCTCACC
CTCTACTTTG CGGCATTGAT CGCCGCCTTG ATCGTGCGAC GACAGTCCAG TGAAATCGCC
CTGCTCAAGT CGCGGGGCGT CAGGAGCGTC CAGATCCTGG GGATGTATCT GGTCGAATGG
TTCATCATCG GTGTGGCGGC GCTGACAGCC GGATTGCCAT TGGGATTGGT GTTTGCCGCC
GTGATGAGCC GGGTGCGCTC GTTTCTCGAT GTGGATTTCT CAGGCGCCAG CGTGCCACTG
GCGCCTGGAG CGCAGAGTCT GACGTTCGCC CTGGCTGTTC TGGCGATAAC CGTTGTGGCG
GCGCTGATTC CGGCGCTGGC GGCAACGCGT CGCACCCTGG TGGACGAACA GCAACAGGCG
GCGCGCGCTG CACGCCCTCC CTTCTGGCAA CGCGCCTACC TCGATCTTCT CCTGCTCGTT
CCTGCGGTAT ACGGCGTCTA TCAGTTGCAA ACGGGCGGCG GGTTGTTTCA GAGAGGCGCC
GATCCGTTCG GTAACCCGCT GCTGGTGCTG ACGCCTGCCC TGATCTGTTT TGCGCTCGGA
TTGCTGGCGC TTCGTCTCAT TCCACTTGTG CTTGAGGCGC TGGCGCGACT GGCAGCCATT
CCCGCGTGGG TGGCGCCGCT GGTGACCCTG CGCGCACTGG CGCGACAGAC CGACAATTAC
CGGGGCGCGT TGCTGCTCCT CATTCTGACG CTTAGCCTGG CGATGTACAG TTCGACCATG
GCTGATGCGT TCGATGGCGC GATGCGCACC GAACTGACCT ACCAGGTCGG TGCGATGACG
CAACTCTTCG AGACCGGTGA AAGCACCGAG CGTGTCCAAC CCGGTCAACC AGGCAGACAA
CCGCAGCCGC CGCGCGATAT TCGTGAGGAA GCGCGCTTTC TCTTCGTGCC AGTGAGTGAG
CATCTCCAGG CGCCGGGCGT GCGCGCGGCA GCGCGTGTTG GTCGCTACGA TGCCGCCGTG
AACATCGGCG CCGGCAGCCG CCAGGTGCAA CTGGTCGGGA TCGACCGCAG CGATTTTCCT
AACGTGATCA CACGGTTTGA TCGCGCCTGG GGCGGCGGCG AGTCACTCGG CGGGTTGATG
AACCTGCTGG CGCGTCATCC GAATGGCGCG CTGGTCAGCC GCGAACTGTT GGGCAACGGG
TTGCAGGTCG GGGATGCGCT CCCCGCCACG CTGCGCATCT ACGGCGACCA GCGTGAGGTG
CGTTTCCGCA TTGTCGCCGC TATCGATCTC TGGCCCGGCT TCTACCCGCA GGACGGTCCA
ATCGTTGTCG TCAACCTGAA CTACATCTTC GACGAAATGG GCGGGCAGTA TCCATACGAT
GTCTGGATCA CCCGTGATCC GCTGCTTCCG ATTGACGAGG TGGTTGCTGG TGTGCGCAGA
CTGGGCATCC CGGTGATCGA CACGCTCGAT GCAGCGATGC TCATCGCCCG CGAGCAGGCG
CGTCCACAGC GGCAGGGGTT GTTTGGCGTG CTGACCATCG GCTTTCTGAC GGCTGGCACG
CTCACCCTGC TCGGATTTCT GGTCGCCGGA TTCATTACGG CGCGACGACG GGCAATCGAG
TTGGGCATGC TGCGGGCGCT TGGTCTGAGC GGCTTCGGCG TTGCAGTGGC GCTTACGCTG
GAACAACTGC TGCTGATCGG CGCCGGTCTG GCGACCGGAA GCGGAATTGG CGCAGTGGCG
GCGCTGCTGA TCGTGCCCTC GATGCAGGTT GGTGTGGGAC CGTATCCTGG CGTACCGGCG
TATCCGCCGC GACTGGCGTG GGAAAGCATG ACCGGCATCT ACGCCGCTTT TGGAGTGACG
CTGGCATTCG CACTGCTGGC GCTTGGCGTT GCCCTGGCGC GTATCCGGTT GTTCCAGGCA
GTGAAACTGG GGGACGTGAA TTGA
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| Protein sequence | MRLILATFSV LTAALKRLRA NLALTLCAWL AAVTAVALAS AIPAYAEAAN LRLLRDEIRQ
QEERAGRSPF ALLFRYVGAW NTPLEWERVA PADDYLRREG IPGLDLPIDS FARHARTAPL
RLFLASGGET VFLKNAPLGF ISGLDDRFRI VDGRMPQPAG NATALDVMIS RAFADEVGLN
VGDALTIVAG GARPATLQAR VAAIWEPINQ NDPAWFFPPQ TLSDVILMAE ESFTGPVAEA
LRNDVDQALW FVRLGSEGIT GAQATPLLSR IETVRARVAG VLPGSRLEQG PAEVLQRYQS
RVSTLTTQLF VFSTPILALT LYFAALIAAL IVRRQSSEIA LLKSRGVRSV QILGMYLVEW
FIIGVAALTA GLPLGLVFAA VMSRVRSFLD VDFSGASVPL APGAQSLTFA LAVLAITVVA
ALIPALAATR RTLVDEQQQA ARAARPPFWQ RAYLDLLLLV PAVYGVYQLQ TGGGLFQRGA
DPFGNPLLVL TPALICFALG LLALRLIPLV LEALARLAAI PAWVAPLVTL RALARQTDNY
RGALLLLILT LSLAMYSSTM ADAFDGAMRT ELTYQVGAMT QLFETGESTE RVQPGQPGRQ
PQPPRDIREE ARFLFVPVSE HLQAPGVRAA ARVGRYDAAV NIGAGSRQVQ LVGIDRSDFP
NVITRFDRAW GGGESLGGLM NLLARHPNGA LVSRELLGNG LQVGDALPAT LRIYGDQREV
RFRIVAAIDL WPGFYPQDGP IVVVNLNYIF DEMGGQYPYD VWITRDPLLP IDEVVAGVRR
LGIPVIDTLD AAMLIAREQA RPQRQGLFGV LTIGFLTAGT LTLLGFLVAG FITARRRAIE
LGMLRALGLS GFGVAVALTL EQLLLIGAGL ATGSGIGAVA ALLIVPSMQV GVGPYPGVPA
YPPRLAWESM TGIYAAFGVT LAFALLALGV ALARIRLFQA VKLGDVN
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