| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2272 |
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| Symbol | |
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| ID | 5209235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2798454 |
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| End bp | 2800295 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595873 |
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| Product | ABC transporter related |
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| Protein accession | YP_001276601 |
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| Protein GI | 148656396 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.11915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGGCG CTTACCGGTA CGATCACCGG TCACCGGTGC GCTGGGTATG GTCGCATGTG
ATGCGCTACC CCTGGCTGCC GATAGCCTTT ATTGTCACCG TGATCGGTAT GGCGACGTTG
CAGAGCTGGA GCGCGGTCCT GGTCGGCGCA GCATTCGACG CGGTGGTTGG CGGCGTGACG
CTGGAGCAAC TGACAACTCT GGCGTTGGTT ATTCTGGGAG TTCGCGTTGC GTTCGGATTG
ATCGATCTCG CCAACAGTTT TGTGGTGCAA CTGCTGGCGC AACTGACGGA GCGGAATACA
CGCGAGGAGT TGTACGTCAG TTTGCTGGGG AAGAGTCTGA CCTTCCATAA CCGCCAGCGC
ACTGGCGACA TCATGGCGCG AGCGACGAAC GATGTGCAGC AGATCAATGC GATGATCAAT
CCGGGAATAA GCCTGATCAT TGAGTCACTG GTCAGCCTGT CGGTTCCGCT GATTGCGATC
ACAACCATCC ATCCACAGTT ATTGCTCATG CCAGCAGTGT TTCTGGTCAG TTTTGTGTGG
GCGCTGCGAC ATTACAACAA TCAACTCAAA CCGGTCGCAG GGGCGCTGCG ACAACAGTTC
GGCGTACTGA ACGCCGGGCT GGCAGAGACG GTGAGCGGCA TTGAGGTCGT GAAAGGGTAT
GCCCAGGAAC CGGCAGAGGA GCGAAAATTC ACGACGAATG CGCGCTCCTA CCGCGACCTG
TTTGTGCGTG AAGGCGGCGT TCAGGCGCGG TACCTTCCGG TGTTGCTCTA CGGTCTGATG
CTCGGTCTTG CTCTTGGGCA TGCGCTGTTG CTGTGGCGCG CCGGTGACAT TTCCATCGGA
CAGATCATCG GCTATATGGG GCTGCTGGAA GTGCTACGCT TCCCGACGTT CATTTCGCTT
TTTACATTCT CGCTGGTGCA ACTGGGGATC GCAGGCGCTG AACGGATGCT TGCCACCATC
ACGGCAACCA CCGAACTCGA TGAGAATGCT GGCGGGTATA GCGCTCCCAT TCAAGGTGAG
ATTCGCTTCG AGCAGGTCAG TTTCGGGTAT CAAACGGCTT CCACGCCTGG GTCGCACAAC
ATGCGCGCCG CTGCCAGTTC TCCCCGTCCT TCCGCGCTGG TGCTGCGCAA CATCACGTTT
ACGGCGCGCC CCGGCGAAAC AATTGCGATT GTCGGGCAGA CGGGTGCAGG GAAAACCACC
CTGACCAGGC TGGTCAACCG GATCTACGAT GCCACCGAAG GACGTATCCT GATCGATGGC
GTCGATGTCC GCGACTGGAA TCTTGACGCG CTGCGTTCTC AAATTTCGAC GATTGAGCAG
GACATCTTCC TGTTTTCACG CACCATTGCC GAGAATATCG CGTTTGGCGC GGCAGGCAAC
GCAACCCGCG AGGAGATCGA ATGGGCGGCG CGTCAGGCGC AGGCGCACGA TTTTATTATG
TCGTTCCCGG ATGGGTATGA AACCGTGATC GGTGAGCGTG GCATGACCCT TTCCGGCGGT
CAACGTCAGC GGATCGCCAT TGCGCGTGCG TTCCTCACCA ATCCCCGCAT CCTGATCCTC
GATGATTCGA CCAGTGCTAT CGACAGTGCG ACCGAGGATC AGATCCAGCG CGCCATGCGA
CGTGTGCTGA CCGGACGGAC GACGCTGCTG ATCACGCATC GTCTTTCGCA AATCCGTTGG
GCAGACCGCA TTCTGGTACT GAAAAATGGC GAACTGGTCG CCCAGGGGAC CCACGATGAA
CTGCTGGAGA CGAGTGAAGC GTACCGTCGC ATTTTTCTGC GCTACGACGC TGGCCATACC
GTTCCCGTCG CGCGCCGCGA CAGGCTTCGG GAGGAGATAT GA
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| Protein sequence | MAGAYRYDHR SPVRWVWSHV MRYPWLPIAF IVTVIGMATL QSWSAVLVGA AFDAVVGGVT
LEQLTTLALV ILGVRVAFGL IDLANSFVVQ LLAQLTERNT REELYVSLLG KSLTFHNRQR
TGDIMARATN DVQQINAMIN PGISLIIESL VSLSVPLIAI TTIHPQLLLM PAVFLVSFVW
ALRHYNNQLK PVAGALRQQF GVLNAGLAET VSGIEVVKGY AQEPAEERKF TTNARSYRDL
FVREGGVQAR YLPVLLYGLM LGLALGHALL LWRAGDISIG QIIGYMGLLE VLRFPTFISL
FTFSLVQLGI AGAERMLATI TATTELDENA GGYSAPIQGE IRFEQVSFGY QTASTPGSHN
MRAAASSPRP SALVLRNITF TARPGETIAI VGQTGAGKTT LTRLVNRIYD ATEGRILIDG
VDVRDWNLDA LRSQISTIEQ DIFLFSRTIA ENIAFGAAGN ATREEIEWAA RQAQAHDFIM
SFPDGYETVI GERGMTLSGG QRQRIAIARA FLTNPRILIL DDSTSAIDSA TEDQIQRAMR
RVLTGRTTLL ITHRLSQIRW ADRILVLKNG ELVAQGTHDE LLETSEAYRR IFLRYDAGHT
VPVARRDRLR EEI
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