Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2256 |
Symbol | |
ID | 5209219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2776947 |
End bp | 2778902 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640595857 |
Product | hypothetical protein |
Protein accession | YP_001276585 |
Protein GI | 148656380 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.562267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAC AGCAGAGATC AATTGGCAAT CAGTATCAGT TTCGCCTGGA GGGGTTTGAA GAGGAGGAAG AAATGGCGGT CGAAAAAAAT GTACGTAACA TTGACCCAAC GTTGGATGAT GGATTTGCAC CGGTGTCTCA AGAAGTTTTC CAGAGCATTG ATGCCGATGC CGAAAAAGCA GGTGGGGCCT GGGAAGAGCC AGAGGAGTAC GTCGGCTCGA TTGGGCGCAC AATGTTTGAT ACGCCATCAA GCAAGGACAA TAGTCTAACA GTGCTCTTGC CGCGTGAAAG TATGGAAAAG GCGCCGTCAC AGTCGCTGGT GCGCATCAAG AGCCGGGATG GCCGATCCTA TCTGGGTGTC GTTATCGAAG GACCGTTTGC TGAGCCTGAC GGTATTCGTG GCGATTCGCC AATTGTGGTG ACGACGACAG TCAAGGGCGG TATTTTCATG CCCAAGTTTC ACGGCCGAGT GCAGGTTGAA ATTCTGGGTG AGGAGGACGA AAGCGGTATG CTCGTTCCGC CGCGCTTTCG TCCTTTGCCG AATAGCCCGG TGTTTGCCCT TAATAGTTGC GAGACCGCGA ATGTATTGAA ACTGGAAGGC GATATTCGAT TGGGATTAGC AGTAGGACAC GAAAACCTGG AGGTGCGCAT TCCTTCTGAT CGCAAATCGG TCCTGCCGCG CCATGTGGGT ATCCTCGGTA CCACCGGCGG TGGTAAATCA ACAACTGTGT CTGGATTGAT CTACAGTCTA CAGAAGGCCG GGATCGCTAC GGTGTTGATC GACACTGAAG GCGAGTACAC CATGATCAAC GAACAGACCA CCGATCGCAC GATGATCGCA GCGCTTGATC GTCGTGGATT GAAACCGGAT GGCGTTCAAA ATACTCATAT CTATCATCTT GTCGGTCGTG AAACAACCAA CCCTGGTCAT CATCCGAAGA CCAGCTTCTG TATAAAATTC GATAAACTCT CGCCTTATCT CGTAATGGAA TTGCTGGAAC TCAACGAACC ACAGGAAACA CGCTACCTGA AAGCGTATGA TATTACGAGG CGCGTCTTGC AAGATCTTAG GATTTCGCCG CAGGCGGGAG AGGATCCATC ACGTTTCTTC GAGTTGGATG AGATGGAAGA GGGATACCCG CAAATGACGC TGGAACAGAT ATACGATATC ATTACAGCGT GTGCTCAAAT CATCGACAAA GCGGAGGATG GTATAGAATT CCACTCGAAG GAGTTTCGCA ACCGCAAAGA TGATGTCATC GCAGCGATTA AGAGGGCTAT CAATGCTGAT AGTAGTAAGA AGTCCGAGGG TTCGCTTCCC GGCGTCGTTA GCAGTTGGCG CGCGCTGCAA GGGAAGATTG GCCGTATTCG TCGCCTGAAG ATTTTCGACA ATCCAGATGC AAAGCCTCTC AACTATCGTG ATCTGACCAG ACCGGGTCAG GTATCGATTA TCGATCTCAG TGACACTGAC TCACCGCGGA TCAACAACCT TGTCATCGCA GAGATTCTTC GCGGAATTCA GGAGCAGCAA GACAGGAACT ATGTCGAAGC AGAGAAAGCA GGTAGACAGC CAAATCGTAC CATTGTAGTT ATTGAAGAAG CGCACGAGTT TCTTTCTGCA GAGCGTATCA AACAAATGCC GGTGCTCTTT CAGCAGGTCG CGCGTATCGC CCGCCGTGGC CGCAAACGCT GGCTTGGGCT TGTCTTTGTG ACGCAACTTC CGCAGCATCT GCCTGATGAA GTGCTTGGCT TGATCAACAA CTTCATTCTG CACAAAATCG CTGACGCTGG CGTTATCAAT CGTCTCAAAC GCTCAGTTAG CGGAATCGAC GAAAGTCTGT GGTCGCGCCT GCCGGGTCTT GCACCGGGAC AGGCAATCGT GTCGATGGCT GGTATGACAC GCCCGTTGCT TGTTGCAATC GATCCCACTC CTTGTAAATT GCGGATGGTC GATTGA
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Protein sequence | MGKQQRSIGN QYQFRLEGFE EEEEMAVEKN VRNIDPTLDD GFAPVSQEVF QSIDADAEKA GGAWEEPEEY VGSIGRTMFD TPSSKDNSLT VLLPRESMEK APSQSLVRIK SRDGRSYLGV VIEGPFAEPD GIRGDSPIVV TTTVKGGIFM PKFHGRVQVE ILGEEDESGM LVPPRFRPLP NSPVFALNSC ETANVLKLEG DIRLGLAVGH ENLEVRIPSD RKSVLPRHVG ILGTTGGGKS TTVSGLIYSL QKAGIATVLI DTEGEYTMIN EQTTDRTMIA ALDRRGLKPD GVQNTHIYHL VGRETTNPGH HPKTSFCIKF DKLSPYLVME LLELNEPQET RYLKAYDITR RVLQDLRISP QAGEDPSRFF ELDEMEEGYP QMTLEQIYDI ITACAQIIDK AEDGIEFHSK EFRNRKDDVI AAIKRAINAD SSKKSEGSLP GVVSSWRALQ GKIGRIRRLK IFDNPDAKPL NYRDLTRPGQ VSIIDLSDTD SPRINNLVIA EILRGIQEQQ DRNYVEAEKA GRQPNRTIVV IEEAHEFLSA ERIKQMPVLF QQVARIARRG RKRWLGLVFV TQLPQHLPDE VLGLINNFIL HKIADAGVIN RLKRSVSGID ESLWSRLPGL APGQAIVSMA GMTRPLLVAI DPTPCKLRMV D
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