| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2250 |
|---|
| Symbol | |
|---|
| ID | 5209213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2770958 |
|---|
| End bp | 2772568 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640595851 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001276579 |
|---|
| Protein GI | 148656374 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1700] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.769234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACATCAT TGGTTGAAAT TGATCTCTCG CCGGAAGTGG AAGGTGATCC GCCCACCCTG
ACCGAATACC AGGCGGTTGA GTTCGTCTCC CTTCCAGGCA ACGCTGAGGC GCTGGAACTG
TCCATCGATG GCGTTGTGCT GTCGCCGTTT CTCCGTCCAG GCGATCCACG CTGGCGCTGG
ACGTGGAATC CAGGAGCGGC TGTCGGCGTC CATACACTGC GCCTTGCTGC CTGCCGGGGA
ACACGTGTCG AACGGGTGTG GCGATTGAAC GTCGCGCCGC GCAAGATCGA CCGCGCGCGC
TATCTCGCCC TGATCGAAGA TGTCGAGCGT GTCGCCATCG GTCTGGTACG CTCGCTGGCA
GGCGCCGTTG TCGAGGCGCA TCTGGCTGCG AGTGAAGGCG CATCCCGCTC GTGGCTCGAT
GATGCTGATA TGCTGTTTGG ATCATTCTTC GACCGATTCG AGCAGGCAGC GCACCGTATT
CTGGCGCATC CCCGCAGCAC CATGCAGCGC GATGAGCGTC AGATGCTGTT GGGGCAGGCG
ACGGATGTTT CAGTTACGGC GCTGCATCGC GCCATTCAGG GTGACCTGGA GGTTGCGCCT
CCCGACGTGG CGACCCATGT GCAGCGGGCA TTGCGCCCAG AAGGCGGATT TCTGCCGCGC
ACCACAGTGC AGCAGCGCAG CAGCGTCACG TTCGATACTG CTGAGCACCG TCTGCTGAAA
CACACCCTGG AAACCCTGCG CGGGCGCGCG CGGCGGTGTG CAGATTGGGC TCAGCGCGAA
GTTACTCGTC TCGATACTGT GGCTCCGGGT TCTTCCCGCG CCGCGCGCGC CCGCGCTATT
GCATCGCGCT GCGACCAGTG CGCTCGTAGG ATCGCCGGTC TGCTTGCCAC GCCGTTCTTC
GACCAGGTGA CAGCGCTGCG CCATGTCCCT GCGGTCACGC CGCTGATCCG GCGCGACCCG
TCGTACCGCC AGATCTACCG TATGTGGCGG GCGCTGCGCC AGCGGCTGGT CGTCGATCCC
GGCGCGCCGT TCGATCTTTC AGTCGTCGAT CTGCCGCTCC TGTACGAACG CTGGTGCGTA
TTGCGCGCCG TTTGGTCGCT CCTCGACCTG GGTGTGGATG TGCATTCCCA TAACCTCCTG
ATAACCCCAC CTGGTGAAAC CGATGCCTGG GCGATCAATC TGCCAAGCGA TGCCCCCTTG
CTGATTGCCG GGTATAAAGG ATGGGACCTG ACGGTGCGCT ATCAGCCGCG CTATCCTCCG
GCAGTAAGTG CCCAGAGTGG CGACACATTC GTGTCACTGG ATCGCCACAC CCGCATCCCC
GATCTTGCGA TCGAAGCCAC GCGACCAGGG CATCCGCCGC GCATCATTGT GCTGGACGCC
AAATATCGCC TGGATGCCGA TGAACGCGCC GTTCCCGCCG ACGCGCTGGC GGAGGCGTAT
GCGTATGCGG GCGCAATTGG AGCGGCAGAC CCTCCATCTG TGGTTGCCGC GCTGATCCTC
TACCCCGGTA CAGGCGCTGC CGAACGCTAT CCCGGCGGCG CTGGCGCCAT CCCGTTGCTT
CCCGGCGCCG TCGATGCGCT GGATGCGGCG CTGACGCGGG AGTTGGGGTG A
|
|---|
| Protein sequence | MTSLVEIDLS PEVEGDPPTL TEYQAVEFVS LPGNAEALEL SIDGVVLSPF LRPGDPRWRW
TWNPGAAVGV HTLRLAACRG TRVERVWRLN VAPRKIDRAR YLALIEDVER VAIGLVRSLA
GAVVEAHLAA SEGASRSWLD DADMLFGSFF DRFEQAAHRI LAHPRSTMQR DERQMLLGQA
TDVSVTALHR AIQGDLEVAP PDVATHVQRA LRPEGGFLPR TTVQQRSSVT FDTAEHRLLK
HTLETLRGRA RRCADWAQRE VTRLDTVAPG SSRAARARAI ASRCDQCARR IAGLLATPFF
DQVTALRHVP AVTPLIRRDP SYRQIYRMWR ALRQRLVVDP GAPFDLSVVD LPLLYERWCV
LRAVWSLLDL GVDVHSHNLL ITPPGETDAW AINLPSDAPL LIAGYKGWDL TVRYQPRYPP
AVSAQSGDTF VSLDRHTRIP DLAIEATRPG HPPRIIVLDA KYRLDADERA VPADALAEAY
AYAGAIGAAD PPSVVAALIL YPGTGAAERY PGGAGAIPLL PGAVDALDAA LTRELG
|
|---|
| |