| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2246 |
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| Symbol | |
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| ID | 5209209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2766955 |
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| End bp | 2768037 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595847 |
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| Product | putative virion core protein (lumpy skin disease virus)-like protein |
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| Protein accession | YP_001276575 |
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| Protein GI | 148656370 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0089947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGC TCGACATTGT TGAATTCGTC GATCCCACAG GCAAAACGCT GGTGGCGCGC
GTGCCGCCGG ATGGCAACGG TGAACTGCGC CTCGGATCGC AGTGTATTGT GCGTGAGGGG
CAACTTGCCT TCTTCGCACG CGATGGGCGC TTCCTCGATA TGCTCATTCC AGGTCGGCAT
ACATTGACGA GTAACAACAT TCCGCTGCTG ATCGACTTCA TCAAACTTCC TTTTGGCAGC
AAAAGCCCGT TTCGCGCCGA CGTCTACTTC GTCAGTCTGC ATCAACACAC CGATCTGAAG
TGGGGTACGC CGCAACCGAT CCCGATGCGC GACGCACAGT TCGGCATGGT GCGTTTGCGG
GCGTTTGGAA CCTTCATCAT CCAGGTGGCG GAACCACGCC GACTGCTGAC CGCAGTGGTC
GGCACCCGTG GACGCCTGAC GGTGCAGGAT GTCGAGGAGC AGCTGCGCAG TTCAATCATT
GCCCGCGTCG CCGATGTGAT TGCCGAGCGG ATGCGTGAGC GCAAACTCTC AGTGCTCGAC
CTGGCGACCG AGTACGATGA ACTCTCCGAG ATGGCGTATG AGGTGTTGAA AGATGATTTT
GCCGCACTCG GCTTGCAGTT GACCCGCTTC TACATCAACA CGATCAGTGT GCCTGAAGAA
CTGGAACGGC GACTCGATCA GGTCGGCGGG GTGGCGGCAT TCGGCGGTCT GGGCGACTAT
ACGCGCTTCA AGGCGGCTGA GGCGTTGCAG GACGCAGCGC GCGCTGGTGG TGATAGCGCC
GTTGGCGCCG GTATCGGACT GGGTGCAGGC ATGAACCTGG GAGCGCTGAT GGGTCAGGCG
CTCCAGCAGC AAACGCCGTC GCCGCAACCG CCGCCACAAC CGGCAGTGCA ACCAGCGGCG
GCGCCAGCAG CGCAGTCAGC AGCGATGAAA GCCTGTCCGC GCTGTGGCGT CAGCGTGCCG
GAGAACGCCA AGTTTTGCAG CGAATGTGGC GCGTCGCTGC GCCCTGCCGC GTGCCCGCAG
TGCGGTCACG CTGTGACACC GGGGGCAAAG TTCTGTATCG AATGCGGTGC AGCGCTGAAG
TGA
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| Protein sequence | MPLLDIVEFV DPTGKTLVAR VPPDGNGELR LGSQCIVREG QLAFFARDGR FLDMLIPGRH
TLTSNNIPLL IDFIKLPFGS KSPFRADVYF VSLHQHTDLK WGTPQPIPMR DAQFGMVRLR
AFGTFIIQVA EPRRLLTAVV GTRGRLTVQD VEEQLRSSII ARVADVIAER MRERKLSVLD
LATEYDELSE MAYEVLKDDF AALGLQLTRF YINTISVPEE LERRLDQVGG VAAFGGLGDY
TRFKAAEALQ DAARAGGDSA VGAGIGLGAG MNLGALMGQA LQQQTPSPQP PPQPAVQPAA
APAAQSAAMK ACPRCGVSVP ENAKFCSECG ASLRPAACPQ CGHAVTPGAK FCIECGAALK
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