| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2195 |
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| Symbol | |
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| ID | 5209158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2704023 |
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| End bp | 2704721 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640595797 |
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| Product | Allergen V5/Tpx-1 family protein |
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| Protein accession | YP_001276525 |
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| Protein GI | 148656320 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0225446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.313074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC GCAAAGGACA ACGAACCATG CACCGCACTG CACCACGCCG CGCCATCGCG
CTGCCGCTGG CAGCGATCTT GCTCACGCTC ATGCTAAGCG CCGTCGCCGC CGCTCAGGAC
GCGCCGCCGC TTGATCCGAT CCCGACGCCA ACCGGCACGT CTACGGCGCT GCGCCCCGAC
GCCGCGCCGC CCGCCGACGA GATCGCAGGC GCGGACGCCG CCGCGTTTCG CGTCTACCTG
CCGCTCGTCG TCCGCCCGGA GCCGTACCCG CCGGTCAACC GCCAGTGGGA ACTGGAGTTC
ATTCGCCTGC TCAACGAGGA ACGCGTCCGC CACGGACTGC ACCCGCTCCG CGAGCACCCG
CTCCTCACCC TCGCCGCCCG CCGCCATGCG TATGACCTCG GCATCAACAA GGTGCCGCGC
GGCGATTGCG GCGGCGGACG CGGGCACCGG GGCACCGACG GCACGGAGCC AGGAGACCGC
GTAGAGTGGG CCGGCTACCC CGGTCACTAC AACGGCGAGG CGGTCAGTTG CGGCAGTCAC
GAGGTGTACT ACGCCGTGCA GGGACTGCTG AACAGCCCGC CCCACCGCGC CATCCTGCTC
AACCCGATCC CGGTCGAGAT CGGCGTCGGC GCGCATCCTG TGCTAGATGA GTTGGGCGGC
TACAGCACCG TCATGCTCAG CGGCACGCCG CGCCCGTGA
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| Protein sequence | MNQRKGQRTM HRTAPRRAIA LPLAAILLTL MLSAVAAAQD APPLDPIPTP TGTSTALRPD
AAPPADEIAG ADAAAFRVYL PLVVRPEPYP PVNRQWELEF IRLLNEERVR HGLHPLREHP
LLTLAARRHA YDLGINKVPR GDCGGGRGHR GTDGTEPGDR VEWAGYPGHY NGEAVSCGSH
EVYYAVQGLL NSPPHRAILL NPIPVEIGVG AHPVLDELGG YSTVMLSGTP RP
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