Gene RoseRS_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2149 
Symbol 
ID5209111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2644519 
End bp2645250 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID640595751 
Productsignal peptidase I 
Protein accessionYP_001276480 
Protein GI148656275 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA CACCACTCCG TCGCCGCCTT GGTCTTGATC GACCATCAAT CGCCGATCAT 
CCGGTCGAAA CGACCGACGT CGCAACCGCC GCCCCGCACC CGATGCCTGC TGTTCGCAGT
GTGGTGCGGG AAATGCTGGA AACCGCCGTC TTCATTCTCC TGGTTTTTCT GATTGTGCGC
GGCGCGATCC AGAACTTCAA GATCGAAGGG CAAAGCATGG AGCCGAATCT GCACAGCGGG
CAGTATATTC TGGTCAACAA ACTGATCTTC TTTCACTTCG ACCTGAATGC GCCCCTGCGC
CTGTTGCCCG GCAATGCCGA TCTGCCGCCG CGCGTCGTCT ATCCTTTTCG CACCCCGCGT
CGCGGCGATG TGGTGGTGTT CGAGTATCCG CGTGATATGA GCAAAGATTA TATCAAGCGC
GTGATCGCCC TGCCGGGAGA GTCGGTCGAG ATCCGGGAGG GGCGCGTGTA TATCAATGGC
GTTCTGCTCG ATGAGCCGTA CCTTCAGGGA ATCACCACTA CGTGCCGCCT GGAAGACCCG
TGCGCGCGCG GTCCCGTCGT GGTCGATCCA GGCACGGTGT TCGTGATGGG GGACAACCGC
GCCAACAGCA GCGACTCGCG CGAGTGGAGC AGTTTGCCGC TGGATCGGAT CATCGGGCAG
GCGTGGATTT CGTACTGGCC GCGTGAGCAT TGGGGCGTTA TTCCTTCGCC GACGTATGCT
GCATTGCCTT AA
 
Protein sequence
MDETPLRRRL GLDRPSIADH PVETTDVATA APHPMPAVRS VVREMLETAV FILLVFLIVR 
GAIQNFKIEG QSMEPNLHSG QYILVNKLIF FHFDLNAPLR LLPGNADLPP RVVYPFRTPR
RGDVVVFEYP RDMSKDYIKR VIALPGESVE IREGRVYING VLLDEPYLQG ITTTCRLEDP
CARGPVVVDP GTVFVMGDNR ANSSDSREWS SLPLDRIIGQ AWISYWPREH WGVIPSPTYA
ALP