Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2103 |
Symbol | |
ID | 5209065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2596630 |
End bp | 2597253 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595705 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001276434 |
Protein GI | 148656229 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAGACG ACAGCGATAC GCGCGATCGG CGACGGCGCA TTCTCGATGC GGCGTTGCAG GTGTTCGGCG CCAAAGGATT TCAGAAAGCG ACCAACCGGG ACATCGCCGA AGCAGCGGGC GGCATTTCGC CGGGCCTGAT CTACCACTAC TTCAAGGACA AACAAGACCT CTTTCTCTGC ATGTTGCGTG AGCGCGCCGC AATTATGGCG CTGGTCGATC ATCCGCAGCA GTTGATGGAT CTGCCGCTCC GTCAGGGGTT GGCCCTGATT GGGCGCTCCT ACCTGACGAT GATGCGCGTT CCAGAGAATG TCGCCTTGTT TCGTATCGTT CTGGCGGAAA CGCTCCACTT CCCGGAAGTT GCAACCATGA TCCGGCAGCA CTTCGTCGAT CGTGTCTTCG GTGTCGTGCG CGCTTACCTG CAGCATCAGA TCGATCTCGG ACGTCTCCGC CCGCACGATA CGGGAGTCAG TGTGCGCACA TTCCTTGGCG GCATTCTGAT CCATGTGATT GCGCGCGAGG TGCTGCGTCA GCCGGAAGCC CTCCAGATCA GCGATGATCA GATCGTCGCA CTGGCAGTTG AGATCTTTCT CCACGGTCTC AGCCTCGAAG CGGAGGAGAT GTAA
|
Protein sequence | MKDDSDTRDR RRRILDAALQ VFGAKGFQKA TNRDIAEAAG GISPGLIYHY FKDKQDLFLC MLRERAAIMA LVDHPQQLMD LPLRQGLALI GRSYLTMMRV PENVALFRIV LAETLHFPEV ATMIRQHFVD RVFGVVRAYL QHQIDLGRLR PHDTGVSVRT FLGGILIHVI AREVLRQPEA LQISDDQIVA LAVEIFLHGL SLEAEEM
|
| |