Gene RoseRS_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2089 
Symbol 
ID5209051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2580552 
End bp2581310 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content58% 
IMG OID640595692 
Producthypothetical protein 
Protein accessionYP_001276421 
Protein GI148656216 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGT CGGTATTCAT TGCCGCTGGA CTGTTTGTTC TGTCGGTTGT TTCAGGCATG 
CTGGGATTGG GCGTCGCTTT TGCTGCGGTG CCATTTCTCG GCTTATTTAT GAACGACCTG
GTTCACGAAG TGCAGCCGTT GAGCCTGTTT TTGAATGGGG TCACTGCTTT ATTCTCTGCA
TTTGGTTTCG CACGCAGTCG TCTGGTGGCA TGGCGGGAAG CGCTATTGCT GGCGCTGGTC
ACAACGCTGT TTGCGCCGCT GGGATCCTGG ATGGCGCAGT TTACCGCACA GTCGTGGCTG
TGGGGACTGT ACCTGCTGGC GGTGCTCTAT CTTGCCTGGC GCATGTTTCA ACCAGAGAAA
GGAAATCGCC CTGCCGACAG TGATACCGTA ACGCCGCGTC GCTTTTCGCT TGCGCTTCTC
CTCGCCATCC CGATCTCGAT CCTGGCAGGT TTGCTGGGGG TTGGTCCAGG ATTCCTGTTG
ATGCCGACGC TGATCATCGC AGGTTTTGCA CCCAAGCGAG CTGCGGGGAT CAATGCAGTC
GCCGTCACAC CGCCGTCGTT CTCGGCGCTT GTACCGCACC TTTCGACCAT GGTGATCGAC
ATGCGCCTGG CTGCCATCCT GGTCGTTGTG GGTGCAACTG GAGCATTCAT CGGCGCCCGG
CTCACCAGCC GATTCGTCTC AGGTCCGCGG CTCAAGCAGG TGTTTGCCGT GCTGATTGTG
GTGGTGACGG CGTATAAACT GGCGACGCTT GTGCAATAG
 
Protein sequence
MERSVFIAAG LFVLSVVSGM LGLGVAFAAV PFLGLFMNDL VHEVQPLSLF LNGVTALFSA 
FGFARSRLVA WREALLLALV TTLFAPLGSW MAQFTAQSWL WGLYLLAVLY LAWRMFQPEK
GNRPADSDTV TPRRFSLALL LAIPISILAG LLGVGPGFLL MPTLIIAGFA PKRAAGINAV
AVTPPSFSAL VPHLSTMVID MRLAAILVVV GATGAFIGAR LTSRFVSGPR LKQVFAVLIV
VVTAYKLATL VQ