| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2009 |
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| Symbol | |
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| ID | 5208971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2492925 |
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| End bp | 2497433 |
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| Gene Length | 4509 bp |
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| Protein Length | 1502 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640595616 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001276345 |
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| Protein GI | 148656140 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0574678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000390887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACATCGC CGACCTTCCC TGAACTACCT GCCGGACTCC GGGCACGCCT GGACGCTGCT
GGCGTCACCG ATGCCGCGAC GCTGGCCGCC GCGCTCGACG CCGACCCGGC GCTGCGGCGC
GAGTACCAGG CATTCCTGCT CGACGCGCTG CCGGCAATCC CCGATGAAGA GCAGTTGCGC
GCCCTCTGGC AGATGATCCC TTCCAAGGAC GAAGACGCCT TCCTGGCCGC CGCCGAAGCC
CGCGCCGCCG CTGCCGAAAC ATCCGGCGAC GCCGGACTGG CTGCTGCGTT GCGCGAACGG
ATTGACGCGC TGCGCTCCTT TCAGCAGGAC ATCGCCAGGG ATGGCGAGAT ACTGCGCCAG
GCGCTCGAAC GCTTGGAAGC CGCCGCGACC GACGATGATC TGGCGGCAGT GTGGCGCGAT
GTGCCGCTGG AACTCGAGGA AACCTTCCTG AACCTTGTCG CGCTGCAGGC CGAGGAGCAT
GAACAGCATG GCGACGCCGA ACGCGCAGCG CACGTCCGCG CCTGCCATGA ACGCTTCAGC
GCGATCCAGC AGCAGCAGCG CGCTGGCGCC GAAACCATGC GCCGGTTGCT GGAACAGTTA
GCAGCGGATG TGGAAGCCCT GGCTGCCGCC GCCGATCATC AGGGCGTTGC CGACGTCTGG
AACCGCATCC CGCTGGAGCT GGAAGAACCC TTCCTGCAAC TGACCGAACA TCTCGCTGGC
GAACTGGAAC AGACCGACGC CGCAACCGCC GCGCGATTGC GCGAATGGAT TGCGGCACTG
AGCCAGGCGC GGGTGCAACG TGAAACAGCG AGAGACATGG TGCGCCAGGC GCTCGAACGC
CTGGAAGCCG CGTCTAGCAG CGACGACGCA TGGCAGGTGT GGCTCGATCT CCCCGGTGAT
CTTGAGGAAT GGTTCCTTCA GGCAATCACC GAACGTATCG AAGAAGTCGA ACGCGACGAT
ACGGGTCTGG CCGAACGGCT GCGCGCGGCG CACGCCCGCA TGCGAGCCGA ACGCAACCGC
CGCCAGGAGC GCGCCAACCA CCCGGTCGTG CAGGCGTTGC GCGCATTCCT CGATGCCGCA
ACCGACGCCG ACGCCACGCG GGTCTTCAAC GAACACAAAG CAATTCTCCA GCCGTTCGAG
GCGCAACGCG AACTCGACGA CCTGGCGCAG CAGGCGCCCG ATGAGCAGCG CGCCGCCATC
GCGGCCCGCG CGGCGTTGCT GCGGCGATTG CGCGGCGGCG ATCCCGCGCC GCGTCCAACC
CCGGCGGCGG CAACCCCTGC TGAGACCAGG ACGGTCACGC CCGGCAGTAT CGTCTATATT
AACTCGGCAG TCGTCGAAGG CGGCAGTGGC ACGGCGATTG TCTACAATAA CATCGTGATG
GAACGCCGCT GGAACCGCCC ATACCCGGAA CGCCTGTCCA TCGACGCCAT CGCGCGCACG
CGCGATCTCG AACAGGTCGC CAGGATCATC ACCGAACGCG GGCAACTGGC GATTACCGGC
GGGACGCGCA CGGCCACCGC TGCAGTCCAG GGCATGCCCG GCATCGGCAA GACCATTCTC
GCGCGCCAGC TGGCGCTGGC GCTGAACGAC CGCTACCCCG GCGGCGTGAT CTGGGAAGAG
ATCGGACCGG AGGTTCGCGC GCCGGAAGAT ACGCAACCCA TCCTGAATCG CTGGGCGCGG
TACGCACTGA CCGTACCGCC GAACCTGGAC AACCAGCTCG CATTCGACGC CAGCGCGGTG
CGCGCGCTGT TCGCCGCCCA GGGACAACCG TTGCTGGTCA TCCTCGACAA TGTCTGGTCG
CTGGAAGCGA TTCGCTGGTT GCGCGCAGCG CTGCCGGAAA ACGCCCATCT GGTGATTACC
ACGCGCCTGG AAACGGTGAT GATCGGTCTG GGGGGCGGCG AGTATGTGCT GGGCCTGCTG
ACGCCGGACG AGGCGCGCGC CTTGATTGCG CTGCGGCTGA ACTGGACCGA ACTGCCGGCC
GACCATTATG ACTGGGCGGA TGCGCTTGCC GTCGGCGTCG GCTACCACAC CCTGGCGCTC
GATGTCGCCA TCCGTCGCCT GCGCCTCGAC GCGCGCTCAC CCGGCGCCCC CCGCTGGCGC
GAACAGGTCA ACCGGTTGCT GGACCATATT CGGAGCGGGC AGGGATTTGA ACGTCTGGCG
CTGCCGGACA GCGAACGCAA CCAGAATGTC GAGGCCGTCC TGGCGTATAG TTACGACCGG
ATGGACGACA CGGCGCGCGC GCGTTTCCGT ATGCTGGGTG CATTTGCGCC GGAAGCAACC
TTTGGCAGCG CCGCCGTCGC CGCACTCTGG CAGTGTGATG TGGAACCGGC GGATGAGATG
CTCAGCGCAT TTGCCGGCGC CGCGCTCCTG GAAGCCGGCG GCGATGATGA TCGCTGGCGC
CAGCATAGCC TGCTACGCGG CTACGCGCTG GCGCTGCTGC GCCGCGAAGG CGAACACGAA
GCCGCCGCCG CGCGCCACGC CGCTTTTTAT GCCGCCGCCA TGCGCACCGC CGACGATGCG
CAGCGCTTCT ACGACGTGCT GGGCGACTAC GCGCAACTCA GGCACGCCTT CGCCTGGGCG
ATCGAGAACG ACCTGGAACT GGCGCTGGAT CTGGTTGCCA ACACCGCGAA CCTGCAAAAA
GCGCATGGCT ATGGCCGCGA CAACCTGGCC TGGGCTGAGC AGGCGCTCGC CGCAGCGCAA
CAGCGCGGCA CGCCGGCGCA GATCGCGCGC GCCCGGGTAT CGCTGGGGAA TGCCCTGCAA
CACGTCGCCA CGCTGGCGGA GGAAGACCGC GCCGCGCGCC TGCGCCAGGC GCTCAGCGCC
TACGACGAGG CGCTGCGCTT TTATACCCCG ACCAGCGCGC CGCTCGATTA TGCGATGACG
CAGAACAACC GGGGGAACGT GTTGCAGGAT TTGGCGACGC TGGCGGAGGA AGACCGCGCC
GCGCGCCTGC GCCAGGCGCT CAGCGCCTAC GACGAGGCGC TGCGCTTCCG AACCCCGACC
AGCGCGCCGC TCGCGTATGC CACCACGCAG AACAACCGGG GCGCCGTGTT GCAGGATTTG
GCGACGCTGG CGGAGGAAGA CCGCGCCGCG CGCTTGCGCC AGGCGCTCAG CGCCTACGAC
GAGGCGCTGC GCTTTTATAC CCCGACCAGC GCGCCGCTCG ATTATGCGAT GACGCAGAAC
AACCGGGGCG CCGTGTTGCG GGATTTGGCG ACGCTGGCGG AGGAAGACCG CGCCGCGCGC
CTGCGCCAGG CGCTCAGCGC CTACGACGAG GCGCTGCGCT TCCGAACCCC GACCAGCGCG
CCGCTCGCGT ATGCCACCAC GCAGAACAAC CGGGGCGCCG TGTTGCAGGA TTTGGCGACG
CTGGCGGAGG AAGACCGCGC CGCGCGCTTG CGCCAGGCGC TCAGCGCCTA CGACGAGGCG
CTGCGCTTCC GAACCCCGAC CAGCGCGCCG CTCGATTATG CGATGACGCA GGGTAATCTG
CTGAATCTCT ATCAAACCCT TGCGGGCGAG CCGGGTGAAG ATCGATTGGC CCGGTTGCTG
GATGCGCTTC GCGCTGGATG GACGGCGTTC GGCTTTTTTA CGGCATTACA ACATTCGGAT
TTTCAGCAAC ATGCCATGCG CCAGCTTCGC GGTCTCCGCG CCGCCTGCGG CGACGACTTC
GATACGCTGT GGGCAGCGCT GGATACGGGA CCGCCGCCGG GGTGGTTGAT CGCGCCGGAG
GAAGGTGAGA CGCCGTCGCT GCCACCTGAC CTTCAGGCGC GCCTGGCGGC TGCTGGCGTT
ACCGTTGAGG ACAGTTTCCT GGCGGCGCTG GCAGCCGATC CGGAATTGCG CGCTGCGGTT
GAGGCGGCGA TGGCGCAGCA ACACCAGGCG CTGCTGGACC AGCTTGTCCA GCGTCTGCTG
GCGGTGTCGT CTGGCGAGGA GTTGCTGGCG TTCTGGCGCG AACTGCCCGC CGAACTGGAC
GAACCGCTGG CTGCCGCTGC TGAGGAAGCG GCGCGCCGGG CCCGGCAGGC TGGCGACGCG
GCGCTGGCGC AGGCGCTGCG TGAGCGCGCC GCAGGTCTGC GCGCCATCCG CGCCGCTGCG
GATGCGGCTC AGTCAAAGAT TCAGCAGGCC TGGCAGCATT ACATTGAACT GGTCGAGGCT
GCTGAGGCGT CGGGAAATGA CATCGCCGCA TGGCGGGCTG CGGTGGAAGC CGGCGAGGCG
CTGCTCGCGC CGGAGTTCAC CGATACACTG GGGATTGGGG ATGCTGTGCG CGAGCATGTT
GCGTCAACCT GGAATGCTCT TGGCAATGCG CTCCACGACG CTGGCGACGG AGAGGCTGCG
GTTGCCGCCT ATGATCGCGC CATTGCGCTG CAACCTGATA AAGCCATGTT GCGGCGCAAT
CGCGTCGCGA CGCTGATCGA CCTGGGGCGG CGCGCTGAGG CGGCGGAGGA ACTGGCGCGC
GCCCGCGCGC TCGAGCCGGA CGCCGCGCGC CTGGCGGAAC TGGAGGCGCG GTTGAGGGAT
GAGGGGTAG
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| Protein sequence | MTSPTFPELP AGLRARLDAA GVTDAATLAA ALDADPALRR EYQAFLLDAL PAIPDEEQLR
ALWQMIPSKD EDAFLAAAEA RAAAAETSGD AGLAAALRER IDALRSFQQD IARDGEILRQ
ALERLEAAAT DDDLAAVWRD VPLELEETFL NLVALQAEEH EQHGDAERAA HVRACHERFS
AIQQQQRAGA ETMRRLLEQL AADVEALAAA ADHQGVADVW NRIPLELEEP FLQLTEHLAG
ELEQTDAATA ARLREWIAAL SQARVQRETA RDMVRQALER LEAASSSDDA WQVWLDLPGD
LEEWFLQAIT ERIEEVERDD TGLAERLRAA HARMRAERNR RQERANHPVV QALRAFLDAA
TDADATRVFN EHKAILQPFE AQRELDDLAQ QAPDEQRAAI AARAALLRRL RGGDPAPRPT
PAAATPAETR TVTPGSIVYI NSAVVEGGSG TAIVYNNIVM ERRWNRPYPE RLSIDAIART
RDLEQVARII TERGQLAITG GTRTATAAVQ GMPGIGKTIL ARQLALALND RYPGGVIWEE
IGPEVRAPED TQPILNRWAR YALTVPPNLD NQLAFDASAV RALFAAQGQP LLVILDNVWS
LEAIRWLRAA LPENAHLVIT TRLETVMIGL GGGEYVLGLL TPDEARALIA LRLNWTELPA
DHYDWADALA VGVGYHTLAL DVAIRRLRLD ARSPGAPRWR EQVNRLLDHI RSGQGFERLA
LPDSERNQNV EAVLAYSYDR MDDTARARFR MLGAFAPEAT FGSAAVAALW QCDVEPADEM
LSAFAGAALL EAGGDDDRWR QHSLLRGYAL ALLRREGEHE AAAARHAAFY AAAMRTADDA
QRFYDVLGDY AQLRHAFAWA IENDLELALD LVANTANLQK AHGYGRDNLA WAEQALAAAQ
QRGTPAQIAR ARVSLGNALQ HVATLAEEDR AARLRQALSA YDEALRFYTP TSAPLDYAMT
QNNRGNVLQD LATLAEEDRA ARLRQALSAY DEALRFRTPT SAPLAYATTQ NNRGAVLQDL
ATLAEEDRAA RLRQALSAYD EALRFYTPTS APLDYAMTQN NRGAVLRDLA TLAEEDRAAR
LRQALSAYDE ALRFRTPTSA PLAYATTQNN RGAVLQDLAT LAEEDRAARL RQALSAYDEA
LRFRTPTSAP LDYAMTQGNL LNLYQTLAGE PGEDRLARLL DALRAGWTAF GFFTALQHSD
FQQHAMRQLR GLRAACGDDF DTLWAALDTG PPPGWLIAPE EGETPSLPPD LQARLAAAGV
TVEDSFLAAL AADPELRAAV EAAMAQQHQA LLDQLVQRLL AVSSGEELLA FWRELPAELD
EPLAAAAEEA ARRARQAGDA ALAQALRERA AGLRAIRAAA DAAQSKIQQA WQHYIELVEA
AEASGNDIAA WRAAVEAGEA LLAPEFTDTL GIGDAVREHV ASTWNALGNA LHDAGDGEAA
VAAYDRAIAL QPDKAMLRRN RVATLIDLGR RAEAAEELAR ARALEPDAAR LAELEARLRD
EG
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