Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1922 |
Symbol | |
ID | 5208883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2387267 |
End bp | 2387932 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595531 |
Product | cobalt transport protein |
Protein accession | YP_001276261 |
Protein GI | 148656056 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.493439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00315513 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTGCT CGACGACATC ACGGTTCGAC CCGCGCGCAA AGGCGCTGGC GTACCTGATC GGCTCGGCGA CCATCATCCT GACAACCGAT CTCGTGCGGC TCGCGCTGAT CACCGGTGTA ACCGGCGCAT TACTGATCGG GCTGGGACTT GAACGACGCT GGTTGCAGGT GATGCGCATC CTGCTGCCGA CACTCCTGCT GTTCGCTCTG GTTGCCGGTT GGAGCGGCGG CTACGAGGCG GCAATCGGCG CTGCGCTGCG CCTGATTGCG CTTGTCAGCG CAGGCATCGT CTTCTTTAGC GTCACCCCGC CCGAAGAATT GGGCGATGCG TTGCTGGCAA GCGGCGTTCC GTCTCAGATG ACCTTTCTGC TGGAAGGAGC GTTGCGCTTT ACACCGCTGA TGGGCGCACT GGCGCGTGAT GTATACGATG CGCAGGCGAG TCGCGGCATC CGGTTCGACG GATGGCATCT GCTGCACAAT GGTCCGTTGC TGCTGACACC GCTGCTGCTG AGTGTGATGC GTTTTGCCGA TGATCTGGCG GAAGGGTTGG AAACGCGCGG ATTCGGCAGC CCGCACCGCA CTCCACTGGG AGACTATCGG GTGCGCTGGC AGGACTGGGC GCTCGTCGGC GCAACCCTGT TCGTGATGAT ACTCATGATG CTGTGA
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Protein sequence | MNCSTTSRFD PRAKALAYLI GSATIILTTD LVRLALITGV TGALLIGLGL ERRWLQVMRI LLPTLLLFAL VAGWSGGYEA AIGAALRLIA LVSAGIVFFS VTPPEELGDA LLASGVPSQM TFLLEGALRF TPLMGALARD VYDAQASRGI RFDGWHLLHN GPLLLTPLLL SVMRFADDLA EGLETRGFGS PHRTPLGDYR VRWQDWALVG ATLFVMILMM L
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