Gene RoseRS_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1922 
Symbol 
ID5208883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2387267 
End bp2387932 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID640595531 
Productcobalt transport protein 
Protein accessionYP_001276261 
Protein GI148656056 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.493439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00315513 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTGCT CGACGACATC ACGGTTCGAC CCGCGCGCAA AGGCGCTGGC GTACCTGATC 
GGCTCGGCGA CCATCATCCT GACAACCGAT CTCGTGCGGC TCGCGCTGAT CACCGGTGTA
ACCGGCGCAT TACTGATCGG GCTGGGACTT GAACGACGCT GGTTGCAGGT GATGCGCATC
CTGCTGCCGA CACTCCTGCT GTTCGCTCTG GTTGCCGGTT GGAGCGGCGG CTACGAGGCG
GCAATCGGCG CTGCGCTGCG CCTGATTGCG CTTGTCAGCG CAGGCATCGT CTTCTTTAGC
GTCACCCCGC CCGAAGAATT GGGCGATGCG TTGCTGGCAA GCGGCGTTCC GTCTCAGATG
ACCTTTCTGC TGGAAGGAGC GTTGCGCTTT ACACCGCTGA TGGGCGCACT GGCGCGTGAT
GTATACGATG CGCAGGCGAG TCGCGGCATC CGGTTCGACG GATGGCATCT GCTGCACAAT
GGTCCGTTGC TGCTGACACC GCTGCTGCTG AGTGTGATGC GTTTTGCCGA TGATCTGGCG
GAAGGGTTGG AAACGCGCGG ATTCGGCAGC CCGCACCGCA CTCCACTGGG AGACTATCGG
GTGCGCTGGC AGGACTGGGC GCTCGTCGGC GCAACCCTGT TCGTGATGAT ACTCATGATG
CTGTGA
 
Protein sequence
MNCSTTSRFD PRAKALAYLI GSATIILTTD LVRLALITGV TGALLIGLGL ERRWLQVMRI 
LLPTLLLFAL VAGWSGGYEA AIGAALRLIA LVSAGIVFFS VTPPEELGDA LLASGVPSQM
TFLLEGALRF TPLMGALARD VYDAQASRGI RFDGWHLLHN GPLLLTPLLL SVMRFADDLA
EGLETRGFGS PHRTPLGDYR VRWQDWALVG ATLFVMILMM L