| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1892 |
|---|
| Symbol | |
|---|
| ID | 5208853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2349588 |
|---|
| End bp | 2350622 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640595501 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_001276231 |
|---|
| Protein GI | 148656026 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.300835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACAT CATCTGATAT CACACACGTT TTGTCCCGGT ACAACCTGGG ACCAGTCGAA
AGAATCGCAG CCGCAGGGCA CGGATTTGTT AATGAGACCG CCATCGTCGT CACCAAATGC
GGGCGCTTCG TGGTACGCCG CAATCATCAC CGGTTTTCAC TGGCTGCAAT TTGCTACCGG
CATCGCCTGA TCGATCATCT CTGTCAGCGA TCATTTCCCA CGGCGCGTCT CGTTCCGAAC
GCTGGCGGAT CAACGGTCAC TATTATTGAC GGGCGGATCT ATGAAGTTCA GGAGTATGTT
CACGGAACGG ATTTCGATCC GCACCGTCCC GGCCAGATCG CGGAGGTTGG CGCAACGCTC
GCCTGTTATC ACCAGGCGGT TGCTGAATTT CCCCCTCCCG GGAACGAGAC GCTACCCCGC
TATGCACCGG CGCGTATTAC CGCGTTGACT GAGACGCTGT ATGAACGAGA CGTGATGGGC
GAACTGCACG CCGATCTCGC CTGGTACGAC GCCCGCGCGG CTGCACTCCG CAGTGCAATG
CCCGATCAGG TCTACGCGGC GTTGCCGCGG GTCTTGATTC ACGGCGATAT GCACCCTGAT
AATGTGCGCT TCGCCGGTGA TCGGGTCGTG GCGCTGCTCG ATTTCGACCA GGTCGAACAC
GATGCGCGAA TCGTTGATCT TGCGGATGCG CTGGTCGGGT TTACGACCAG ACCGCTGCCA
TCTGAAGCGA CGTCGTGGGG CGTCTTCCGC GGTCCGCTGG ATATTGCGCA GACGATCACC
CTGGTGTGCA GTTATGGGCA GATTGCGCCG CTGCTCCCTG GCGAAGTCGC TGCGTTGCCG
GTGCTGATCG AGGTTCTCTG GTTGCGCAGC GAACTCGGAC GTGTCATCTC GACGCCGGAA
GGAGCGCCCG ATTACCACGC GGCAGTGCTG GCGCAGGGGA AGCGTCTTTC GGCGTGGATG
CAGCAGCACG CCAGCACGCT GATCGACCAC TGGAGCAACG CAACTATCGG TCGCACGGGG
GCGCTGGCAG CCTGA
|
|---|
| Protein sequence | MLTSSDITHV LSRYNLGPVE RIAAAGHGFV NETAIVVTKC GRFVVRRNHH RFSLAAICYR
HRLIDHLCQR SFPTARLVPN AGGSTVTIID GRIYEVQEYV HGTDFDPHRP GQIAEVGATL
ACYHQAVAEF PPPGNETLPR YAPARITALT ETLYERDVMG ELHADLAWYD ARAAALRSAM
PDQVYAALPR VLIHGDMHPD NVRFAGDRVV ALLDFDQVEH DARIVDLADA LVGFTTRPLP
SEATSWGVFR GPLDIAQTIT LVCSYGQIAP LLPGEVAALP VLIEVLWLRS ELGRVISTPE
GAPDYHAAVL AQGKRLSAWM QQHASTLIDH WSNATIGRTG ALAA
|
|---|
| |