| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1890 |
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| Symbol | |
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| ID | 5208851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2344848 |
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| End bp | 2346782 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640595499 |
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| Product | hypothetical protein |
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| Protein accession | YP_001276229 |
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| Protein GI | 148656024 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.543078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC TCGCACCGCT CGCCCTCCTC AGCGCCCTTA TCGTGGGTCC ACTGATTGTG
GCGATGTATC TGTTGAAACT GCGTCGTGAG GAACGTCGCG TCTCTTCGAC GTTCCTGTGG
CGACGCATGG TGCGCGATGT CGAGGCGAAT GCGCCCTGGC AGCGTCTGCG GCGCAACTGG
TTGCTGCTCC TTCAGTTGCT GATCCTGATT CTGCTGGCGA TTGCGCTGGC GCGCCCCTTC
TTCCTGACGA CCGGCATCAG CGGGCGGAAC CTGATTATCA TTCTTGATCG CTCGGCGAGC
ATGGCGGCGA CCGATGTCGC TCCATCACGT CTGGAGGCGG CGCGTCGCCA GGCGCAGACG
CTGGTTGAAC AACTGCCCGA AGGCGGGCGC GCAACCATTA TTGCGATTGG CGGGCAGATG
GAGGTGGTCG CTGCATCCAC CACCGATCGC CGCCAGATGA ACGATGCGAT TCGTTCGATC
ACCCCCAGTG TCGGCAGTCG CAGCGATCTC TCGCAGGCGC TGGCGCTTGC TGCTGCGTTG
TCGGCGCGTG AACCCGATAG CGAGGTCGCC ATCATTTCCG ATGGGAATGT GCAGGTTCCA
ACCGATATCC TGGTTCCGGC GACCGTGCGC TACTTCCCCA TCGGTCAACG CGGCGAAAAT
ATGGCGATCA GCGCGATGAC CCTGCAACCC GGACCTGCCG GTCAAACGCT GTTCGTCCAG
GTGACCAGGT ATGGTTCGGC GTCGGTCACG CGACGGCTTG ATCTGTACCT CGATGGTTCG
CTCTTCAATG CGTATGAACT GAACTTCACC GCTGACGATG CGCCGGGAGC CTCGCAGACC
GTTATCGTCG ATATTCCGGC TCAGGTGCGC GTCGCCGAAG CGCGTCTCAA CGCTGCGCCG
AATGAGGACT ACCTTCCGAC TGATGATCGC GCGTGGGCGG TGAGTCAGGC GGGCGCTGGC
ATGAATGTGC AAATCGTCGG TCCCGGCAAC CGGTTTCTCA CAACGGCGCT CGCGCTGCTG
CCCGGCGTTA CGGCGACCAG CGCAACAACA GCGTCAGGTG CGGTCGATCC GGCGCCACAG
GTGACGATCT TCGATCGGGT CGTGCCGGAA ACATTGCCGA CCGGGAATCT GTTCTTTATT
GCGCCGCCGC GTTCAACCGA TCTCTTTTCG GTGACCGGCG TCGTCGAGTT TCCGCTGTTG
CGTCCGGCGC CATCCGCAAT TGAAGGACAG ACGCCGCCGC TGTTGCGCAA TATCAGTGTG
AGTGACGTGA ATGTCCTGCG TGCGATGCGG GTCGAGCCGG GGATATGGGC GCGTGTGCTG
GTCGAGGGGG ATGGCAGCCC GATGCTGCTG GCTGGAGAAC GTGAAGGACG TCGGATCGTG
GTGCTGGCAT TTGCGCTCCA GGACTCCGAT CTGCCGCTCC AGGTCGCATT TCCGCTGCTG
GTCTCGAACA TTATTGGCTA TCTTGCGCCG GGCAGCGGTC TTGAAGCGTC GCAGATCACG
CCGGGACAAC CGCTGATCGT GGCGGTTGAT CCCTCGGCGA CTGCGGTGCG TGTGGTGCGA
CCGGACGGGC GCGTTGAGGC GGCGCAGGTT CAAGACGGGC AGGCGATCTA TGCCAGCACC
GGGATGATCG GACCCTACCT GGTTGAGCAG GTGCGCGGCG ATCAGGTGAT CGAACAGCGT
CGCTTCGCCG TTAATCTGTT CGATCCAGAC GAATCGAACA TTGCACCGGC GAGCGAGTTG
CGCGTGTCGC AGGTGAGCGG TTTGCAGCAG GCAGTCACCC GTGAACAGGT CGGGCGCCAG
GAGATCTGGC GCTGGCTGGC TGCCGCAGCG TTGCTGGTCG TCGTGGTCGA ATGGCTTGTG
TACCAGCGGA ACAGCCTGGC GTACCTGCGG CAGCGTTTCC GCCACATGCT TGCTGCGCGT
CGCCAATCGG CGTAG
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| Protein sequence | MSLLAPLALL SALIVGPLIV AMYLLKLRRE ERRVSSTFLW RRMVRDVEAN APWQRLRRNW
LLLLQLLILI LLAIALARPF FLTTGISGRN LIIILDRSAS MAATDVAPSR LEAARRQAQT
LVEQLPEGGR ATIIAIGGQM EVVAASTTDR RQMNDAIRSI TPSVGSRSDL SQALALAAAL
SAREPDSEVA IISDGNVQVP TDILVPATVR YFPIGQRGEN MAISAMTLQP GPAGQTLFVQ
VTRYGSASVT RRLDLYLDGS LFNAYELNFT ADDAPGASQT VIVDIPAQVR VAEARLNAAP
NEDYLPTDDR AWAVSQAGAG MNVQIVGPGN RFLTTALALL PGVTATSATT ASGAVDPAPQ
VTIFDRVVPE TLPTGNLFFI APPRSTDLFS VTGVVEFPLL RPAPSAIEGQ TPPLLRNISV
SDVNVLRAMR VEPGIWARVL VEGDGSPMLL AGEREGRRIV VLAFALQDSD LPLQVAFPLL
VSNIIGYLAP GSGLEASQIT PGQPLIVAVD PSATAVRVVR PDGRVEAAQV QDGQAIYAST
GMIGPYLVEQ VRGDQVIEQR RFAVNLFDPD ESNIAPASEL RVSQVSGLQQ AVTREQVGRQ
EIWRWLAAAA LLVVVVEWLV YQRNSLAYLR QRFRHMLAAR RQSA
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