Gene RoseRS_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1889 
Symbol 
ID5208850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2343924 
End bp2344832 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID640595498 
Producthypothetical protein 
Protein accessionYP_001276228 
Protein GI148656023 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.231187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.484176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCATG GTGCATCGGT GACAACCTCC TCTGCACAAC CGTTGTTCGA TTCGGCGTTT 
CTGCGCAAAC TGGATCGCCT GGCGCTGCTG ACGCGTCGCG CAATGGTCGG CGACATCCAG
GGGGAGCGGC GCAGTCCGCG ACGCGGGTCG TCGGTCGAGT TCGCCGATTT TCGCCCCTAT
GTCCACGGCG ATGATATTCG CCAGATCGAC TGGAACCTGT ATGCGCGGAT GGAACGCTTC
TTCCTCAAAC TCTTCGTGGC GGAGGAAGAG TTGACGATCC ATCTGCTGGT CGATAACAGT
GCGTCGATGG ATTGGGGCGA CCCGCATAAA TTGACCTATG CCCGCCGTCT GGCGGCGGCG
TTTGGGTATG TTGCGCTTTC GACGCTTGAT CGAGTGACGG TTACGGCGTT TGCAGCGGGC
GCTGGCGCGC AACTCCGCGG TGTGCGCGGC AAAGCCGGGG CGCTGCCGTT GTTCGCGTTT
CTTCAGCGCC TCCAACCTGG CGGCTCGGGA GACCTCGCCG CTGCCTGCAA ACGCTATGTG
CGCACCGCCA TCAATCCGGG ACCGCTGATC CTCTGTTCCG ACCTGCTCGA TCCGCACTGG
GAGGAAGCGC TGCGCGCGCT GGGGTCGCGC CCGTTCGAGA TAACCCTGAT CCATATTCTG
GCGCCGCAGG AATTGCGCCC GCAACTCGAT GGCGATTTTC GTCTGCTGGA CGCCGAGACC
GGCGAGGCGG TCGAAATCAC CGCCGATCTG GAAACGTTGC AGCGCTACCT TGAGCATCTC
CGCGACTGGC AGGAGTCGAT TGAGCGCTTC TGCCACGGAC GTGGTATCAC ATATGTGCAA
GTCGATACGG CGCAACCGGT CGAGGAGTTC ATTCTGACGA TGTTACGTCA GCGCGGCGTG
TTTCGTTGA
 
Protein sequence
MCHGASVTTS SAQPLFDSAF LRKLDRLALL TRRAMVGDIQ GERRSPRRGS SVEFADFRPY 
VHGDDIRQID WNLYARMERF FLKLFVAEEE LTIHLLVDNS ASMDWGDPHK LTYARRLAAA
FGYVALSTLD RVTVTAFAAG AGAQLRGVRG KAGALPLFAF LQRLQPGGSG DLAAACKRYV
RTAINPGPLI LCSDLLDPHW EEALRALGSR PFEITLIHIL APQELRPQLD GDFRLLDAET
GEAVEITADL ETLQRYLEHL RDWQESIERF CHGRGITYVQ VDTAQPVEEF ILTMLRQRGV
FR