Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1889 |
Symbol | |
ID | 5208850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2343924 |
End bp | 2344832 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595498 |
Product | hypothetical protein |
Protein accession | YP_001276228 |
Protein GI | 148656023 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.231187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.484176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGTCATG GTGCATCGGT GACAACCTCC TCTGCACAAC CGTTGTTCGA TTCGGCGTTT CTGCGCAAAC TGGATCGCCT GGCGCTGCTG ACGCGTCGCG CAATGGTCGG CGACATCCAG GGGGAGCGGC GCAGTCCGCG ACGCGGGTCG TCGGTCGAGT TCGCCGATTT TCGCCCCTAT GTCCACGGCG ATGATATTCG CCAGATCGAC TGGAACCTGT ATGCGCGGAT GGAACGCTTC TTCCTCAAAC TCTTCGTGGC GGAGGAAGAG TTGACGATCC ATCTGCTGGT CGATAACAGT GCGTCGATGG ATTGGGGCGA CCCGCATAAA TTGACCTATG CCCGCCGTCT GGCGGCGGCG TTTGGGTATG TTGCGCTTTC GACGCTTGAT CGAGTGACGG TTACGGCGTT TGCAGCGGGC GCTGGCGCGC AACTCCGCGG TGTGCGCGGC AAAGCCGGGG CGCTGCCGTT GTTCGCGTTT CTTCAGCGCC TCCAACCTGG CGGCTCGGGA GACCTCGCCG CTGCCTGCAA ACGCTATGTG CGCACCGCCA TCAATCCGGG ACCGCTGATC CTCTGTTCCG ACCTGCTCGA TCCGCACTGG GAGGAAGCGC TGCGCGCGCT GGGGTCGCGC CCGTTCGAGA TAACCCTGAT CCATATTCTG GCGCCGCAGG AATTGCGCCC GCAACTCGAT GGCGATTTTC GTCTGCTGGA CGCCGAGACC GGCGAGGCGG TCGAAATCAC CGCCGATCTG GAAACGTTGC AGCGCTACCT TGAGCATCTC CGCGACTGGC AGGAGTCGAT TGAGCGCTTC TGCCACGGAC GTGGTATCAC ATATGTGCAA GTCGATACGG CGCAACCGGT CGAGGAGTTC ATTCTGACGA TGTTACGTCA GCGCGGCGTG TTTCGTTGA
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Protein sequence | MCHGASVTTS SAQPLFDSAF LRKLDRLALL TRRAMVGDIQ GERRSPRRGS SVEFADFRPY VHGDDIRQID WNLYARMERF FLKLFVAEEE LTIHLLVDNS ASMDWGDPHK LTYARRLAAA FGYVALSTLD RVTVTAFAAG AGAQLRGVRG KAGALPLFAF LQRLQPGGSG DLAAACKRYV RTAINPGPLI LCSDLLDPHW EEALRALGSR PFEITLIHIL APQELRPQLD GDFRLLDAET GEAVEITADL ETLQRYLEHL RDWQESIERF CHGRGITYVQ VDTAQPVEEF ILTMLRQRGV FR
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