| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1879 |
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| Symbol | |
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| ID | 5208839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2331722 |
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| End bp | 2332579 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595487 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001276218 |
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| Protein GI | 148656013 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGA CAAAGCAGGA CGAAAAATTT CGCTTGCAAC GCCGGTTGCA GAACCAGGCA
GTTGAACTGG CGGTCAACAA CCGCTGGGAA GAAGCGGTAC AGGTCAACCA GAAGTTGATC
AGCCTCGCCG AAACGACCGA AACGTACAAT CGGCTCGGCA AGGCATACTT CGAGTTGGGG
CGTCTGGCGG AAGCGCGCGA CGCCTACCGC AATGCGCTGC GGCTCACTCC GAACAACCGC
ATTGCGCGCA GAAATCTCGA GCGCATCGAA GAACTGCTGG CGCGTTCGGC ATCCCTTTCC
GGCGGGCTGA AAGCCGGGCG ACAACTCGTT GATCTGCGGT TGTTCATCAC CGAAGTCGGC
AAAACCGCGC TCACATCGCT GATCGACGTC CAGCGCGGAC CGGCGCTCGC GGCGGTTGTC
ACGGGCGAGA AAGTCGAACT GCGTCCTGAA GGGCGGGGTG TGGCGGTCTA CGATATGTCG
GGCGCGCTGA TCGGACGCAT CGAGCCAAAA CTGGCGCAAC GCCTGAATGA ACTGATGGCG
GGCGGCAACC GCTACATCGC TGCTGTCGCC CACATCGACG GGCGGCAGGT ACGGATTATC
ATCCGTGAGA TCTATCAGTC GCCATCACAG CGCGGTCGGG TCTCCTTCCC CGGCAAACTG
AGCGAAAGCG CCCTGCGTGG CGGGTTCATC AGCGGTGCAC AGTTCGACGA ATTTGGTGAG
GAGTTGCTTG AGGAAGAAGA GGGCGTCGAG GTGCGCGAAG AGGTGGAAGA AGAGGTCTTT
GGCGGCGAAG AGGAGGAGCT CGGTCTGGAA GAGATCGAGC CAGACATCGG CGACGAGGAC
GATCTGATCG AAGAATGA
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| Protein sequence | MTLTKQDEKF RLQRRLQNQA VELAVNNRWE EAVQVNQKLI SLAETTETYN RLGKAYFELG
RLAEARDAYR NALRLTPNNR IARRNLERIE ELLARSASLS GGLKAGRQLV DLRLFITEVG
KTALTSLIDV QRGPALAAVV TGEKVELRPE GRGVAVYDMS GALIGRIEPK LAQRLNELMA
GGNRYIAAVA HIDGRQVRII IREIYQSPSQ RGRVSFPGKL SESALRGGFI SGAQFDEFGE
ELLEEEEGVE VREEVEEEVF GGEEEELGLE EIEPDIGDED DLIEE
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