Gene RoseRS_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1871 
Symbol 
ID5208831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2315554 
End bp2315808 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content58% 
IMG OID640595479 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_001276210 
Protein GI148656005 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.727532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGCC TGCTGATCTA CGACATTCCC GACGACCGTG TGCGGCAAAA GATCGCCGAC 
GCCTGTCTCG ACTACGGGCT GCAACGGATT CAATACAGCG CATTTGCAGG CAACCTGAGC
CGCACCCACC AGCGCGAACT GATGACCGAA GTCAGGCGGC GGTTGGGCAA ACACGCTGGC
AACATCCAGC TCTTCACCTT TCCGGACGAC ATCTGGAACG CGCGACGTAC TATCGAACAG
GGGGAAGAAT CATGA
 
Protein sequence
MRCLLIYDIP DDRVRQKIAD ACLDYGLQRI QYSAFAGNLS RTHQRELMTE VRRRLGKHAG 
NIQLFTFPDD IWNARRTIEQ GEES