Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1843 |
Symbol | |
ID | 5208803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2276963 |
End bp | 2278225 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595451 |
Product | von Willebrand factor, type A |
Protein accession | YP_001276182 |
Protein GI | 148655977 |
COG category | [R] General function prediction only |
COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.122736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG AGGTCACAAT TCGCGCGTCG CTGGCGCGCC CATACATGGC AGCAGCGGCG ACGCCGCAGG TTGCCTATAT GCTGATCGAA ATCACGCCTG GTCAGGTGAT GACGCAGGTG CGTGCACCGG TCAATGTCTG TTTCGTGATT GACCGGAGCG GCTCGATGAA GGGCGAGAAG ATCGACCGGG TGCGACGGGC GACGATCCGC GCCATTGAGA TGCTCGATGC GCAGGATGTC GTCTCGGTGG TCATCTTCGA TCATCGAACC GAGGTGCTGA TCCCTGCCAC GCCGGTGACC AGACCTGCCG AACTGATCGA CCGTATCAAT CGTGTGCGCG ACAGTGGCGG CACCCGGATC GCACCGGCCA TCGAAGCGGG ATTGCGCGAG ATCGAGAAGG GACCGCCACA GATGGTGCGG CGGCTCATTT TGCTCACCGA CGGTCAGACC GAGAACGAGT CCGACTGCCT GCGCCGTGCT ACGGATGCCG GGCAACGCAA TGTGCCGATC ACGGCACTCG GTGTGGGCAA GGATTGGAAC GAAGACCTGC TGATCGAAAT GGCGAACCGT TCAGGCGGAA CTGCCGATTA CATTGATCGT CCGGAAAAGA TCGTCGAGTA CTTCCAGAGC ACCATCCAGC GCGCCCAGGC GACTGCGGTG CAGAATGCAA ACCTGACGCT GCGACTGGTG CAGGGAGTGC TGCCACGCGC AGTATGGCAG GTCTACCCGC TGATCAACAA TCTCGGCTAC CGCCCGATCT CCGACCGTGA TGTCAGCGTG CCGCTCGGTG AACTGGAAAC CGGCAGCGGT CGCACCCTGC TGATCGAAGT GCTGGTCGAG CCGCGCCCGG CAGGTGAATA TCGCATCGGG CAGGCGGAAG TGAGTTACGA CATTCCGCTG CTGAACCTGC GCGATGAAAA GACCCGCGCC GACATCATGC TCACGTTTAC GACCGACGCT GCGCTTGCGA GTCAGGTAAA TGCCAGCGTC ATGAACATTG TTGAAAAGGT CAGCGCCTTC AAACTGCAAA CGCGAGCGCT GCAAGACCTG GCGGCCGGCG ATGTCACCAG CGCGACGCAA AAATTGCAGA GCGCCGTGAC CCGTCTGCTC AACCAGGGCG AAGTCGAACT GGCGCAGACG ATGCAGCGCG AAATCCAGCA CCTGCAACAG ACAGGCAAAC TCTCCAGCGA AGGACAGAAG ACGATCAAGT TTGGAGTACA GAAAACCGTT CGCCTGAGCG ACATCAAGAA AGATGAACCC TGA
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Protein sequence | MAGEVTIRAS LARPYMAAAA TPQVAYMLIE ITPGQVMTQV RAPVNVCFVI DRSGSMKGEK IDRVRRATIR AIEMLDAQDV VSVVIFDHRT EVLIPATPVT RPAELIDRIN RVRDSGGTRI APAIEAGLRE IEKGPPQMVR RLILLTDGQT ENESDCLRRA TDAGQRNVPI TALGVGKDWN EDLLIEMANR SGGTADYIDR PEKIVEYFQS TIQRAQATAV QNANLTLRLV QGVLPRAVWQ VYPLINNLGY RPISDRDVSV PLGELETGSG RTLLIEVLVE PRPAGEYRIG QAEVSYDIPL LNLRDEKTRA DIMLTFTTDA ALASQVNASV MNIVEKVSAF KLQTRALQDL AAGDVTSATQ KLQSAVTRLL NQGEVELAQT MQREIQHLQQ TGKLSSEGQK TIKFGVQKTV RLSDIKKDEP
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