Gene RoseRS_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1795 
Symbol 
ID5208754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2219555 
End bp2220175 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID640595403 
Productformylmethanofuran dehydrogenase, subunit E region 
Protein accessionYP_001276135 
Protein GI148655930 
COG category[C] Energy production and conversion 
COG ID[COG2191] Formylmethanofuran dehydrogenase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.272508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00939532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAGA CCATTCCCAA CAATTCGCTG CTCGATGACA TCCTCGAACA CTCGGCGGCA 
TTGCACCGCC ATCTCTGTCC GCGACAGGTA CTGGGTGCAC GTATGGGCAT TCTGGCGGGA
CGATTGCTCG GCCTGGAGTT GCCGCAGCAG AACAAGCGGC TGTACACATT CGTCGAAACT
GATGGATGCT TTGCCGACGG GGTCGGCGCT GCAACTGGAT GCTGGCTGGG TCGGCGCACC
ATGCGCCTGA TCGATCACGG CAAGGTTGCA GCAACGTTTG TCGATACGCG CACCCGGCGC
GCCGTGCGAA TTCGCCCGCA TCCACAGGCG CGAACGGAAG CGCGGCACTA CGCTCCGGGC
GCAAAAAGTC GCTGGCACGC TTATCTCGAA GCCTATCGGA TCATGCCGGA TGATGTGCTG
CTTGAGGCGC AATGGGTCGA ACTGACCCTG GATCTCGACC GGTTGATCAG TCGTCCGGGA
GCGCGAACGG TATGCCATGG GTGTGGCGAA GAGATCATCA ATGAGCGCGA AGTAACGCTG
GATGGAACGA TCCTGTGCAG GGGATGCGCA TTCGAGGAGG ATCGCTACGT CAGGTCAGTG
ACGACGATGC CGGATCGATA A
 
Protein sequence
MIETIPNNSL LDDILEHSAA LHRHLCPRQV LGARMGILAG RLLGLELPQQ NKRLYTFVET 
DGCFADGVGA ATGCWLGRRT MRLIDHGKVA ATFVDTRTRR AVRIRPHPQA RTEARHYAPG
AKSRWHAYLE AYRIMPDDVL LEAQWVELTL DLDRLISRPG ARTVCHGCGE EIINEREVTL
DGTILCRGCA FEEDRYVRSV TTMPDR