| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1793 |
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| Symbol | |
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| ID | 5208752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2215273 |
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| End bp | 2218317 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595401 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_001276133 |
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| Protein GI | 148655928 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.546724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0478269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT CACTGGTGAA GAACATCCTG CGCACACTGG CGCAGCGGCA GCGTGCGGAA
GCGCAACAGG AAGTCGTTGC GCGCCAACCG GCGACACAGC CCGGCGCCGT CGAACGGAGT
GTGCCACAAC CGGCGCCAGC GCATGCCGTG CAAGGAGCGA CTGCCGAATT GAGCGGCTAC
CCGCCGGTTG AGCGCTGGCA GCACTGGACG GAGTATGACC CGAAGGCATG GCCCCAGAAA
ATCTCGCGTT CCTATACGCT GGTTCCGACG ATCTGCTTCA ACTGCGAAAG CGCCTGTGGA
CTCCTGGCGT ATGTCGATAC ATCCACGCTC AAGATTCAGA AATTCGAGGG CAATCCATTA
CATCCCGGCA GTCGTGGTCG CAATTGCGCA AAAGGACCGG CAACGCTCAA TCAGGTGTAT
GACCCGGATC GCATTCTCTA CCCGCTCAAA CGAGTCGGGC GGCGTGGCGA AGGGAAATGG
AAGCGTGTCA GTTGGGACGA GGCGCTCGAT GATATTGCGG CGCGCATCCG CTGTGCCATC
GTCGAAAAAC GCCTGACCGA AATCATGTAC CACGTCGGTC GTCCGGGGCA CGATGGCATC
ATGGAATGGG TACTGCCCGC CTGGGGGGTG GATGCCCACA ATTCGCACAC GAATGTCTGC
TCGTCGAGTG CGCGTTGTGG ACAGGCGTTG TGGATGGGGT ATGATCGCCC TTCGCCCGAT
CATGCGCACG CACGAGTCAT TCTGCTGATC AGTTCGCACC TGGAGACCGG ACACTACTTC
AACCCGCACG CGCAGCGCAT TATGGAAGGG AAAATGGCAG GCGCGAAACT GATTGTCTTC
GACACGCGCC TGTCGAACAC CGCATCGCTG GCTGATGAGT GGATCGCCCC CTGGCCCGGC
AGTGAAACCG CGATTTTGCT GGCGATCGCC CGGCATCTGA TCGTCACCCG GAAATATGAC
CGCACCTTTG TGCGTCGCTG GGTCAACTGG GAAGAATACC TGCGCCACGA GCATCCCGAT
CTGCCGCTGC GTTTCGAGAC GTTTGAGGCG AAACTGGAAG AACTCTATGC CCGCTACACG
TTCGAGTTTG CGGCGCAGGA GAGCGGCGTG AGCGTCGAGC AGATCGCGCG GGTAGCGGAT
TACATTGCGC AGTGCGATGG TCGCCTTGCG ACCCATACCT GGCGGAGCGC CACCAGCGCC
AATCTGGGTG GATGGATGGT CGCTCGCTGT CTCTGGTTCC TGAATGTGCT GACCGGATCG
ATAGGCAAGG AAGGCGGCAC ATCGGCGAAC GTGTGGGACA AATGGGTTCC GCGCCATCCG
AATATGGCGC CGCACGTCAA AGTGTGGAAC GAACTGACCT GGCCCCAGGA ATACCCGCTC
AGCTTCTACG AACTGAGTTA TCTTCTCCCG CACTTTCTCA AAGAACAGCG CGGCAAGATC
GACGTTTACT TCACCCGTGT GTACAACCCG CTCTGGACCA ATCCCGACGG CATGAGCTGG
ATGGAAGTGT TGACCGACGA GTCGAAGATC GGGTTGCATG TACACCTTTC GCCGGGCTGG
AGCGAGACGG GTCTGTTCGC CGATTATATT CTGCCGATGG GTCATGGCGC CGAGCGCCAC
GATATGATGA GTCAGGAAAC CCATGGCGGT TGCTGGATCG CATTTCGCCA GCCAGTGATC
CGCGAGGCGC TGCGCCGTCT GGGCAGACCG GTCGATGACA CGCGCAAGGC GAATCCCGGC
GAAGTATGGG AAGAGACCGA GTTCTGGATC GAACTGTCGT GGCGGATTGA CCCGGACGGC
AGTCTGGGAA TTCGCAAAAC ATTCGAAAGC CCGTATCGAC CCGGCGAGAA GATCACCGTG
GATGAACTCT ACGGCTGGAT GTTCGAGAAC CATGTGCCCG GATTGCCCGA AGCGGCGGCG
AAGGAAGGGT TGACGCCGCT GGAATATATG CGTCGCTATG GTGCGTTTGA AATACGCAAA
GGCGTTCAGC CGACCTATGA TCAACCCCTG GCTGAATCGG AAGTGGAAGG TGTAACGGTC
GATCCGGAAA CACGCGTGGT CTATACAAAG AAGCCGGCTG CTCCCTCATC GAACATCACG
CCGGTGCCAT ACTTCCAGCC GGACCCGGAG CGTGGCCGTC CGATTGGGGT GCAACTCGAA
GATGGCTCAC TCGTGTCTGG CTTCCCTACG CCGTCACGCA AACTGGAGTT TTATTCCACC
ACCATGCGCC ATTGGGGATG GCCCGAATAT GCAATCCCGA CATACGTTCA CAGCCACGTG
CATCCCAGCA AGATCGACCG CGAGCGAAAC GAAGCGATTC TGCTCTCGAC GTTCCGTCTA
CCGACGCTGA TCCACACTCG CAGCGGTAAC GCGAAGTGGC TCTATGAGAT CAGTCACAAG
AATCCGGTCT GGATCCACCC CTCCGATGCG CAGCGACTTG GCGTGCAGAC CGGTGACCTG
ATCAAAGTCG TCACCTCGAT AGGGTACTTT GTCGATCGGG TCTGGGTGAC GGAAGGCATT
CGTCCGGGGG TCATCGCCTG TTCCCACCAT CTTGGGCGCT GGCGACTCCG GGAGGATGAA
GGGGGGAAAC TTTCGACGGC GCTGGTCGAA CTTGCGCCTG CGGGTGAGTC GCGGTGGCAG
ATGCGCCAGG TGCACGGAAT CAAACCGTAT GCGAGCGCTG ACCCCGATAC CGAACACATC
TGGTGGGAAG ATGCTGGTGT TCATCAGAAT CTGACCTTCG CCGTTCAGCC GGATCCGGTC
AGCGGCATGC ACTGCTGGCA TCAGAAAGTG CGTCTGGAGC GGGCAGGACC GGACGACCGG
TACGGTGACA TTTTTGTCGA TACCCGGCGC GCGCACGAGG TGTACCGGGA ATGGCTGGCA
ATGACCCGCC CGGCGAGTCA GGTATCACCG AACGGTCTCC GGCGACCGCA CTGGTGGCTC
CGTCCATTCC GCCCCGATCT GGAAGCCTAT TATCTTCCCG GTCGAGACCC CGGCAACGGG
CATATCGCCG TCCATGCGGT ATCAGCTTCC GATCATAAGA AATGA
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| Protein sequence | MADSLVKNIL RTLAQRQRAE AQQEVVARQP ATQPGAVERS VPQPAPAHAV QGATAELSGY
PPVERWQHWT EYDPKAWPQK ISRSYTLVPT ICFNCESACG LLAYVDTSTL KIQKFEGNPL
HPGSRGRNCA KGPATLNQVY DPDRILYPLK RVGRRGEGKW KRVSWDEALD DIAARIRCAI
VEKRLTEIMY HVGRPGHDGI MEWVLPAWGV DAHNSHTNVC SSSARCGQAL WMGYDRPSPD
HAHARVILLI SSHLETGHYF NPHAQRIMEG KMAGAKLIVF DTRLSNTASL ADEWIAPWPG
SETAILLAIA RHLIVTRKYD RTFVRRWVNW EEYLRHEHPD LPLRFETFEA KLEELYARYT
FEFAAQESGV SVEQIARVAD YIAQCDGRLA THTWRSATSA NLGGWMVARC LWFLNVLTGS
IGKEGGTSAN VWDKWVPRHP NMAPHVKVWN ELTWPQEYPL SFYELSYLLP HFLKEQRGKI
DVYFTRVYNP LWTNPDGMSW MEVLTDESKI GLHVHLSPGW SETGLFADYI LPMGHGAERH
DMMSQETHGG CWIAFRQPVI REALRRLGRP VDDTRKANPG EVWEETEFWI ELSWRIDPDG
SLGIRKTFES PYRPGEKITV DELYGWMFEN HVPGLPEAAA KEGLTPLEYM RRYGAFEIRK
GVQPTYDQPL AESEVEGVTV DPETRVVYTK KPAAPSSNIT PVPYFQPDPE RGRPIGVQLE
DGSLVSGFPT PSRKLEFYST TMRHWGWPEY AIPTYVHSHV HPSKIDRERN EAILLSTFRL
PTLIHTRSGN AKWLYEISHK NPVWIHPSDA QRLGVQTGDL IKVVTSIGYF VDRVWVTEGI
RPGVIACSHH LGRWRLREDE GGKLSTALVE LAPAGESRWQ MRQVHGIKPY ASADPDTEHI
WWEDAGVHQN LTFAVQPDPV SGMHCWHQKV RLERAGPDDR YGDIFVDTRR AHEVYREWLA
MTRPASQVSP NGLRRPHWWL RPFRPDLEAY YLPGRDPGNG HIAVHAVSAS DHKK
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