Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1735 |
Symbol | |
ID | 5208692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2135835 |
End bp | 2137025 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640595341 |
Product | putative transcriptional regulator |
Protein accession | YP_001276075 |
Protein GI | 148655870 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.256151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.15639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGT GGGAACTCCA ACGGCGGATT GCGCGCTGGG AAGATATACA TACTGAGTTC AAAGAGCAGG ATGTCCATAC CGATGACATT GCTGCGGCGT TGGTGGCTTT TGCCAACACC GATGGCGGAC AGTTGATCTT CGGCATCAAT CAAAACCGGG CCATTATCGG CGTTGATGAC CCTGATCGCC TGATGCAGCG CGTTGATCAG ATTGCCTGGA ACAACTGCGA GCCGCCGCTC ACCGTCCTGC AAGAAACCAT TCGCAGCGAG GAAGGCCGCG TCGTGGTGGT TGTCAACATC CCTAAAGGGG ATCAGCGCCC CTATCGTACC ATCAGAGGCG ACTACTTCAT ACGCACCACC TCGGGACGCC GACGGGCTTC CCGGCAAGAA CTGCTCCGCC TGTTTCAATC GACGGAGAGT CTCTATTACG ATGAGACCGT GGTCTGGCGC GCCACGTTAC GCGATCTGGA CGAACAGCGT TTTGCCGATT TCTTCCGGCG GTCCTATAAC CGCGAGATCA CGTCAGAGCA AGAAACAGAG CGCCTGATGA AAAACATGCG CTTGCTGGAA GAACGTGAGG GCGCATGGCG TCCCACACTG GCGGGCCTGC TCTGCTTCGG ACGAGAGCCG CAGCGATTTC TGCCGTATGC GCAGATCAGC GCTGCCCGCA TCCCCGGTGA GACGCTGGCG CTGGCGCCTT CCGATGCCAG GACGATCGGC GGCACGTTGT TCGACATGCT GGAAGATGCC GCCCGCTTTC TGCGGATTCA TCTGCGCCGC CCGCACGTCA TCCAGGGATT TGAGCCTGAA GAACGCCCGG AGATCCCCGA AGAAGCCTTG CGCGAGTTGC TGGTCAACGC GCTGGTGCAT CGCGATTACA CCGTCACTTC TCCGATTCGC GTCTTGATCT TCGATGATCG CATCGAAATC CGCACACCGG GCAACCTGCC CAACACAGTT ACGATCGAGG CAATTCTTCT GGGCGCTGCG CATGTTTTGC GCAATCCCAT CATCTACACC ATGTTCAGTC GCGCCGGACT GGTCACTCAC CTCGGCAGCG GCGTGTTGCG CGCCAGACAA CTCATTGAGC AGGACGCGCG CGCCACACTG CGCCTGGAAG TTGTGGCGAA CGAGTTCGTG GTTTCTGTTT CCCGTCCCGA AATGTGGCAT GGACCGGGCG GACAGCAATA G
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Protein sequence | MDMWELQRRI ARWEDIHTEF KEQDVHTDDI AAALVAFANT DGGQLIFGIN QNRAIIGVDD PDRLMQRVDQ IAWNNCEPPL TVLQETIRSE EGRVVVVVNI PKGDQRPYRT IRGDYFIRTT SGRRRASRQE LLRLFQSTES LYYDETVVWR ATLRDLDEQR FADFFRRSYN REITSEQETE RLMKNMRLLE EREGAWRPTL AGLLCFGREP QRFLPYAQIS AARIPGETLA LAPSDARTIG GTLFDMLEDA ARFLRIHLRR PHVIQGFEPE ERPEIPEEAL RELLVNALVH RDYTVTSPIR VLIFDDRIEI RTPGNLPNTV TIEAILLGAA HVLRNPIIYT MFSRAGLVTH LGSGVLRARQ LIEQDARATL RLEVVANEFV VSVSRPEMWH GPGGQQ
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