Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1702 |
Symbol | |
ID | 5208659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2093415 |
End bp | 2097953 |
Gene Length | 4539 bp |
Protein Length | 1512 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595308 |
Product | hypothetical protein |
Protein accession | YP_001276042 |
Protein GI | 148655837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCC GTTTCCGGTT CCTTCGCTAT GTGCTGATTG TTGTGCTTCT TGTTGTTTCC ATTCCGCTTC TATCGGCGCC GGGGCATTCG TCCTTCATAG AACGAATGAC AACTCCTCCG GCCGCCATCG CACAGAGTGC TGCGCCAGTC GGTCCGCAGC CGGGTGATGT GTTCCGGCAG TTTCAGGACG ACCTGAACTC CCGGCAGACC TCTGTCTGCA ATTCATCACC TGCGAATTGC GGTACGATAC CGTCGGAACA GCAACGGCAG GCGCGAAACG TCGATCTTGC CAACGCGGTG CGCGCCGAAG CAGTGTTCGA GTATTGGGGC GGGCACCTCG CTTCGACGCA GCAGGAATTC AATGTGAACG GCGGTCCGTG GACGCCCTAC CCGGATATTC AGGGCATCCC TCCTGATACG CTCCCGACCT GTTATTTCCG CGCGCCAACC AACGCGATTG CGCCGTTGCC CCTGAGTGGA ACCGGTGGTG TTCGTCCACC GGGCAGCACC GGCAGTACCG TGACGGTCAA CTACCGCTAC CGGATCGGTC CGCAGCGGTC ATTGCCGCAG TGCGCCTCAG GCACGAACTT CTACTGGGGC AACATGTGGA TCTATGAGGT GACAACGCGC ATCTACTACA ACTCGACCAT CCCGCGCCCT GATGGCGCAA TCACTTCGCC TACGGATGGC GCCACAATCA CCGAGAACCG CAGCGCCAAC CAGTTTCCGC GCATCACGGT GCGGGCGCAG GCATCGACCG GTCGCTCGAT TGCGCGCGTC GACCTGATCG GGAATTATCT CGATTATGAC TGGGATGGCG ATGGCATATT GCGCGAATGG CACTACGCGC TGCGCCACGG CGTCTGGGAA CGCACCATCG GGACGAGCAC GTCGCCGTCG CGCGGTACGG CAACCAGTGG AGAGTACGAT TTTACCTGGA ATACGGAATG GATTCCGGAT CAGGATCAAC CAGTGCAGTT GATGGCGCGG ATCACCGATA ACACCGGGGT CAGTTACATG ACCGAGGCGG TGACGGTCAC GTTCAACCGC GTCGGGCGCA GTGTGCGGAT GTACACCACC TGGAGCGACT ACTATGGGCA GCGGGTGTTC GGTCCGCCGC GCAACTTTGG CTTTAATACC TACAGTCAGC CGCGGATTGG AAAGACAGCG TTCATTTCCA TCCCGGATCC GCTCACGAAT GCAACCAGAG CGCGGGTTAT TCTCTACAGT TGGAGCGGTC GTTCGTCGAC TGCGTTGAGC ACCACGGTTG CTATCAATGC CTTCTCAGTC TGGTCTGGAA ATTCCTTCGG TATATTCCAC GATTACAATT TCGATACGCG CGACCTTAAT AATCCCCGCG ATTTTCTCAA TCAGGGCGAC AATATCCTGC GCATCTGGTC GAATCGTACC GATCACGCAC TTGAAGTGCT CTGGCCCGGT CCGGCGATCT TCGTTGAGTA TAGCGCTCCG CCCGAAACCC CGGTGTTGCG CGCTATCGAT ACCTCCTTCA GCACACCGGA GGATCAATCG CTGTCGTTCA CGCTGCCGGT GAGCAATCAG GCGCGCGCCG CGCTCCAGTA TACGATTCTG ACTCCGCCTG CGCTCGGAAC ACTGCGTGGC ATCGCTCCCA ATCTGACCTA CATCCCCAAC CCGGATGTCA ACGGCAGCGA TAGTTTTGTG TTCCGCGTCG ATGATCAGTA TGGACGTAGC GCTACGGCGA CCGTCGCCAT CAATATTCAG GCGGTTGATG ACCCGCCGGA GATAACGCTG GGCGGCGGGG CGTTGCTGAA TCCCGACGAT GTGCTGGATC GTTCCGGCAG GGTGCGCGAT CCGGATTCTT CATCGCTGAC GGCGACGGTC GATTATGGCG ATGGCCGCGG TGAGCAACCG CTGAGTCTTG GGGCAGACGG CTCGTTCCGG CTGATCTACC GATACCGCAA CGGCGGGCGC TTTCCGCTGA CGGTGCGGGT CAGCGATGGC GCGCAGACCA GCGTTGCAAC CGTGCTGGTG ACCGTGATCA CCCCCGGCAC GCCTCCGCCC CCCGGTGACT GGAGCCTGAC AGGATGGCGC TATCGTGTGC CGCTGGAGGC GCGCTCAGGC GCATATCCGC GTGTCGATCA CGTTGCCGAG TTTGATGTTA ACTTTACCAC TGCGCTGTCA CAGGCAGGTG GAAGCGGCGC GTTGCTGCGC GAATCGATCC GTGTGGTCGA GGTTGACGCA GGCGGTAATG TGATTGATCC GAATGTCGTC TATCAGTTCG ATCCGGTGAG CGCCTACAAT CCGACGACCA ATGCGCGCGG AACGCTGCTG GTGCTGTTAC GCGGACGCAC CGAGGCAAAC ACAACCCGTC GTTTCTATGT CTACTTCGAG ACGCAGGGGC GCTTTGCGCC GCCGACATTC ACGCCGCTGA CGGTGGTCGT CACGCCGACG CTGATCTATC AGCGTGACCT GGCAACTGTT ATCGAGACGC GCACGTCTGA TGGTCAGCGC AACGCTACGT TCTATTACTC GCTCAACGGT GGCGCGCTTA TCAGCATGTT TGATCGCTCG AATGCGGACT GGATTTCGTA CAATCCGGCA GCCGACTCGG CAGGCGCGTA CCGCGGTATT CCGAACGTCG GTCCGGTCTT CCATCCCGGA TACTACAATG TGTTCCCCAT TCCGAGCGCG TCAGGTCCGC TTCAGGGGAA CGAACCCGGT ACGAACCAGC GATCATCGAC GACCATCGAA CGGGAAGGAA CGCTGCGCAC TATCGTGCGC TCGGTGAGCA GCAATGGGCA GTGGGAGGCA GTGTGGGAGT TCTTCCCCAA CAGTGTGCGG ATGTTGGTGC TGCCCAGAGA GCCGCGCGGT TCAAATCCGT TCCTCTACTG GTGGCTGTAC GAAGGGACGC CAGGCGGAAC GCTCAATGAG GGCGACCGCT GGGTGCGCGG CGATGGATTG TCTGGTATCG CCGTCGATCC CAGTTTCTCC TTCAACGAAC GCTTCCATGC CGACATCAAC GGTCCGGAGT GGGTCTACTT CCGTGCCGGT GAACCGTCTC AGGGCGGACG GGCGCTGTGG CTGGCGCACC ATGATGATAC CGACACGACG ATTGAGATGT ATCGCTATCA GAATGACTCC TCCGGCTGGC AGAATGGCAT GACTGTCTTC GGTTTCGGTC GGCGCGAATG GGACGGGTCG TCGCAGACGT TGCGCCCGGA ACTGCGAAAT CAACGCCGTT TCTCGCTTGG GTTCATCGAT AATGCGCCAT TGACATTCGA TAGCGCTGTG GGGCGCGAGA TCGAGGGGCG TTACCGTGAT CTGGCAGCGA CCGTCGGGCG GGGTGAGCGC CTGGCGCCGA ACCTTGCGCC GTGGGCGCCG GGAGAGACCT ACAGCGTTCG CCCTGGTCAG ACGCTGAATG TGCCAGCGCC CGGCGTGCGC GCCAATGACA GCGACGGCGA TGGCGATCCG TTCCAGGTGA CACTGACCGG TGAGCCGCAG AACGGCACAC TCACGTTCAA CAGCGACGGT TCCTTCATCT ATGTTCCAAA TGAAGGCTTC GTCGGCGCCG ACGTCTTCAC CTATACGGCG AGCGATGGGC GGCTCAGCGC CCCGCCAACG ACGGTGACCA TCCTGGTTTC CCCCAATCAG CCGCCGACGG CGCGGGGGAG CAGCGCAACG ACGACCAACC TGCGCCCGTT GACTGTGCCG GCGCCGGGGG TGCTGGAAGG GGCAAGCGAC CCGGATGGCG ATCCGCTGAC GGCGGTGCTG ATCAGTCCGC CCGCTGGCGG AACGCTGAAC CTCAACCCGG ACGGGTCGTA CACCTACACG CCGCGTTCGG ATTTCATCGG CGAGGATGTG TTCCAGATCG CCGCCTCTGA CGGTGAGGCG CAGTCGGCGC CGGTCGAGGT GCGGATCACG GTGCGCAAGG AAAATCGTCC GCCGACGGCG CGGGGGAGCA GCGCAACGAC GACTAACCTG CGCCCGTTGA CTGTGCCAGC GCCGGGGGTG CTGGAGGGGG CGAGCGACCC TGACGGCGAT CCGCTGACGG CGGTGCTGAT CAGTCCGCCC GCTGGCGGAA CGCTGAGCCT CAACCCGGAC GGGTCGTACA CCTACACGCC GCGTTCGGAT TTCATCGGCG AGGATGTGTT CCAGATCGCC GCCTCTGACG GTGAGGCGCA GTCGGCGCCG GTCGAGGTGC GGATCACGGT GCGCAAGGAA AATCGTCCGC CGACGGCGCG GGGGAGCAGC GCAACGACGA CTAACCTGCG CCCGTTGACT GTGCCGGCGC CGGGGGTGCT GGAGGGGGCG AGCGACCCTG ACGGCGATCC GCTGACGGCG GTGCTGATCA GTTCGCCCGC TGGCGGAACG CTGAGCCTCA ACCCGGACGG GTCGTACACC TACACGCCGC GTTCGGATTT CATCGGCGAG GATGTGTTCC AGATCGCTGC CTCTGACGGC GAGGCGCAGT CGGCGCCGGT CGAGGTGCGG ATCACGGTGA CGCGCGAGGT TGCTTCGACG CCAGAGTATC GGGTATTCCT GCCGCTGCTT GTGCGCTGA
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Protein sequence | MPARFRFLRY VLIVVLLVVS IPLLSAPGHS SFIERMTTPP AAIAQSAAPV GPQPGDVFRQ FQDDLNSRQT SVCNSSPANC GTIPSEQQRQ ARNVDLANAV RAEAVFEYWG GHLASTQQEF NVNGGPWTPY PDIQGIPPDT LPTCYFRAPT NAIAPLPLSG TGGVRPPGST GSTVTVNYRY RIGPQRSLPQ CASGTNFYWG NMWIYEVTTR IYYNSTIPRP DGAITSPTDG ATITENRSAN QFPRITVRAQ ASTGRSIARV DLIGNYLDYD WDGDGILREW HYALRHGVWE RTIGTSTSPS RGTATSGEYD FTWNTEWIPD QDQPVQLMAR ITDNTGVSYM TEAVTVTFNR VGRSVRMYTT WSDYYGQRVF GPPRNFGFNT YSQPRIGKTA FISIPDPLTN ATRARVILYS WSGRSSTALS TTVAINAFSV WSGNSFGIFH DYNFDTRDLN NPRDFLNQGD NILRIWSNRT DHALEVLWPG PAIFVEYSAP PETPVLRAID TSFSTPEDQS LSFTLPVSNQ ARAALQYTIL TPPALGTLRG IAPNLTYIPN PDVNGSDSFV FRVDDQYGRS ATATVAINIQ AVDDPPEITL GGGALLNPDD VLDRSGRVRD PDSSSLTATV DYGDGRGEQP LSLGADGSFR LIYRYRNGGR FPLTVRVSDG AQTSVATVLV TVITPGTPPP PGDWSLTGWR YRVPLEARSG AYPRVDHVAE FDVNFTTALS QAGGSGALLR ESIRVVEVDA GGNVIDPNVV YQFDPVSAYN PTTNARGTLL VLLRGRTEAN TTRRFYVYFE TQGRFAPPTF TPLTVVVTPT LIYQRDLATV IETRTSDGQR NATFYYSLNG GALISMFDRS NADWISYNPA ADSAGAYRGI PNVGPVFHPG YYNVFPIPSA SGPLQGNEPG TNQRSSTTIE REGTLRTIVR SVSSNGQWEA VWEFFPNSVR MLVLPREPRG SNPFLYWWLY EGTPGGTLNE GDRWVRGDGL SGIAVDPSFS FNERFHADIN GPEWVYFRAG EPSQGGRALW LAHHDDTDTT IEMYRYQNDS SGWQNGMTVF GFGRREWDGS SQTLRPELRN QRRFSLGFID NAPLTFDSAV GREIEGRYRD LAATVGRGER LAPNLAPWAP GETYSVRPGQ TLNVPAPGVR ANDSDGDGDP FQVTLTGEPQ NGTLTFNSDG SFIYVPNEGF VGADVFTYTA SDGRLSAPPT TVTILVSPNQ PPTARGSSAT TTNLRPLTVP APGVLEGASD PDGDPLTAVL ISPPAGGTLN LNPDGSYTYT PRSDFIGEDV FQIAASDGEA QSAPVEVRIT VRKENRPPTA RGSSATTTNL RPLTVPAPGV LEGASDPDGD PLTAVLISPP AGGTLSLNPD GSYTYTPRSD FIGEDVFQIA ASDGEAQSAP VEVRITVRKE NRPPTARGSS ATTTNLRPLT VPAPGVLEGA SDPDGDPLTA VLISSPAGGT LSLNPDGSYT YTPRSDFIGE DVFQIAASDG EAQSAPVEVR ITVTREVAST PEYRVFLPLL VR
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