Gene RoseRS_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1702 
Symbol 
ID5208659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2093415 
End bp2097953 
Gene Length4539 bp 
Protein Length1512 aa 
Translation table11 
GC content62% 
IMG OID640595308 
Producthypothetical protein 
Protein accessionYP_001276042 
Protein GI148655837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCC GTTTCCGGTT CCTTCGCTAT GTGCTGATTG TTGTGCTTCT TGTTGTTTCC 
ATTCCGCTTC TATCGGCGCC GGGGCATTCG TCCTTCATAG AACGAATGAC AACTCCTCCG
GCCGCCATCG CACAGAGTGC TGCGCCAGTC GGTCCGCAGC CGGGTGATGT GTTCCGGCAG
TTTCAGGACG ACCTGAACTC CCGGCAGACC TCTGTCTGCA ATTCATCACC TGCGAATTGC
GGTACGATAC CGTCGGAACA GCAACGGCAG GCGCGAAACG TCGATCTTGC CAACGCGGTG
CGCGCCGAAG CAGTGTTCGA GTATTGGGGC GGGCACCTCG CTTCGACGCA GCAGGAATTC
AATGTGAACG GCGGTCCGTG GACGCCCTAC CCGGATATTC AGGGCATCCC TCCTGATACG
CTCCCGACCT GTTATTTCCG CGCGCCAACC AACGCGATTG CGCCGTTGCC CCTGAGTGGA
ACCGGTGGTG TTCGTCCACC GGGCAGCACC GGCAGTACCG TGACGGTCAA CTACCGCTAC
CGGATCGGTC CGCAGCGGTC ATTGCCGCAG TGCGCCTCAG GCACGAACTT CTACTGGGGC
AACATGTGGA TCTATGAGGT GACAACGCGC ATCTACTACA ACTCGACCAT CCCGCGCCCT
GATGGCGCAA TCACTTCGCC TACGGATGGC GCCACAATCA CCGAGAACCG CAGCGCCAAC
CAGTTTCCGC GCATCACGGT GCGGGCGCAG GCATCGACCG GTCGCTCGAT TGCGCGCGTC
GACCTGATCG GGAATTATCT CGATTATGAC TGGGATGGCG ATGGCATATT GCGCGAATGG
CACTACGCGC TGCGCCACGG CGTCTGGGAA CGCACCATCG GGACGAGCAC GTCGCCGTCG
CGCGGTACGG CAACCAGTGG AGAGTACGAT TTTACCTGGA ATACGGAATG GATTCCGGAT
CAGGATCAAC CAGTGCAGTT GATGGCGCGG ATCACCGATA ACACCGGGGT CAGTTACATG
ACCGAGGCGG TGACGGTCAC GTTCAACCGC GTCGGGCGCA GTGTGCGGAT GTACACCACC
TGGAGCGACT ACTATGGGCA GCGGGTGTTC GGTCCGCCGC GCAACTTTGG CTTTAATACC
TACAGTCAGC CGCGGATTGG AAAGACAGCG TTCATTTCCA TCCCGGATCC GCTCACGAAT
GCAACCAGAG CGCGGGTTAT TCTCTACAGT TGGAGCGGTC GTTCGTCGAC TGCGTTGAGC
ACCACGGTTG CTATCAATGC CTTCTCAGTC TGGTCTGGAA ATTCCTTCGG TATATTCCAC
GATTACAATT TCGATACGCG CGACCTTAAT AATCCCCGCG ATTTTCTCAA TCAGGGCGAC
AATATCCTGC GCATCTGGTC GAATCGTACC GATCACGCAC TTGAAGTGCT CTGGCCCGGT
CCGGCGATCT TCGTTGAGTA TAGCGCTCCG CCCGAAACCC CGGTGTTGCG CGCTATCGAT
ACCTCCTTCA GCACACCGGA GGATCAATCG CTGTCGTTCA CGCTGCCGGT GAGCAATCAG
GCGCGCGCCG CGCTCCAGTA TACGATTCTG ACTCCGCCTG CGCTCGGAAC ACTGCGTGGC
ATCGCTCCCA ATCTGACCTA CATCCCCAAC CCGGATGTCA ACGGCAGCGA TAGTTTTGTG
TTCCGCGTCG ATGATCAGTA TGGACGTAGC GCTACGGCGA CCGTCGCCAT CAATATTCAG
GCGGTTGATG ACCCGCCGGA GATAACGCTG GGCGGCGGGG CGTTGCTGAA TCCCGACGAT
GTGCTGGATC GTTCCGGCAG GGTGCGCGAT CCGGATTCTT CATCGCTGAC GGCGACGGTC
GATTATGGCG ATGGCCGCGG TGAGCAACCG CTGAGTCTTG GGGCAGACGG CTCGTTCCGG
CTGATCTACC GATACCGCAA CGGCGGGCGC TTTCCGCTGA CGGTGCGGGT CAGCGATGGC
GCGCAGACCA GCGTTGCAAC CGTGCTGGTG ACCGTGATCA CCCCCGGCAC GCCTCCGCCC
CCCGGTGACT GGAGCCTGAC AGGATGGCGC TATCGTGTGC CGCTGGAGGC GCGCTCAGGC
GCATATCCGC GTGTCGATCA CGTTGCCGAG TTTGATGTTA ACTTTACCAC TGCGCTGTCA
CAGGCAGGTG GAAGCGGCGC GTTGCTGCGC GAATCGATCC GTGTGGTCGA GGTTGACGCA
GGCGGTAATG TGATTGATCC GAATGTCGTC TATCAGTTCG ATCCGGTGAG CGCCTACAAT
CCGACGACCA ATGCGCGCGG AACGCTGCTG GTGCTGTTAC GCGGACGCAC CGAGGCAAAC
ACAACCCGTC GTTTCTATGT CTACTTCGAG ACGCAGGGGC GCTTTGCGCC GCCGACATTC
ACGCCGCTGA CGGTGGTCGT CACGCCGACG CTGATCTATC AGCGTGACCT GGCAACTGTT
ATCGAGACGC GCACGTCTGA TGGTCAGCGC AACGCTACGT TCTATTACTC GCTCAACGGT
GGCGCGCTTA TCAGCATGTT TGATCGCTCG AATGCGGACT GGATTTCGTA CAATCCGGCA
GCCGACTCGG CAGGCGCGTA CCGCGGTATT CCGAACGTCG GTCCGGTCTT CCATCCCGGA
TACTACAATG TGTTCCCCAT TCCGAGCGCG TCAGGTCCGC TTCAGGGGAA CGAACCCGGT
ACGAACCAGC GATCATCGAC GACCATCGAA CGGGAAGGAA CGCTGCGCAC TATCGTGCGC
TCGGTGAGCA GCAATGGGCA GTGGGAGGCA GTGTGGGAGT TCTTCCCCAA CAGTGTGCGG
ATGTTGGTGC TGCCCAGAGA GCCGCGCGGT TCAAATCCGT TCCTCTACTG GTGGCTGTAC
GAAGGGACGC CAGGCGGAAC GCTCAATGAG GGCGACCGCT GGGTGCGCGG CGATGGATTG
TCTGGTATCG CCGTCGATCC CAGTTTCTCC TTCAACGAAC GCTTCCATGC CGACATCAAC
GGTCCGGAGT GGGTCTACTT CCGTGCCGGT GAACCGTCTC AGGGCGGACG GGCGCTGTGG
CTGGCGCACC ATGATGATAC CGACACGACG ATTGAGATGT ATCGCTATCA GAATGACTCC
TCCGGCTGGC AGAATGGCAT GACTGTCTTC GGTTTCGGTC GGCGCGAATG GGACGGGTCG
TCGCAGACGT TGCGCCCGGA ACTGCGAAAT CAACGCCGTT TCTCGCTTGG GTTCATCGAT
AATGCGCCAT TGACATTCGA TAGCGCTGTG GGGCGCGAGA TCGAGGGGCG TTACCGTGAT
CTGGCAGCGA CCGTCGGGCG GGGTGAGCGC CTGGCGCCGA ACCTTGCGCC GTGGGCGCCG
GGAGAGACCT ACAGCGTTCG CCCTGGTCAG ACGCTGAATG TGCCAGCGCC CGGCGTGCGC
GCCAATGACA GCGACGGCGA TGGCGATCCG TTCCAGGTGA CACTGACCGG TGAGCCGCAG
AACGGCACAC TCACGTTCAA CAGCGACGGT TCCTTCATCT ATGTTCCAAA TGAAGGCTTC
GTCGGCGCCG ACGTCTTCAC CTATACGGCG AGCGATGGGC GGCTCAGCGC CCCGCCAACG
ACGGTGACCA TCCTGGTTTC CCCCAATCAG CCGCCGACGG CGCGGGGGAG CAGCGCAACG
ACGACCAACC TGCGCCCGTT GACTGTGCCG GCGCCGGGGG TGCTGGAAGG GGCAAGCGAC
CCGGATGGCG ATCCGCTGAC GGCGGTGCTG ATCAGTCCGC CCGCTGGCGG AACGCTGAAC
CTCAACCCGG ACGGGTCGTA CACCTACACG CCGCGTTCGG ATTTCATCGG CGAGGATGTG
TTCCAGATCG CCGCCTCTGA CGGTGAGGCG CAGTCGGCGC CGGTCGAGGT GCGGATCACG
GTGCGCAAGG AAAATCGTCC GCCGACGGCG CGGGGGAGCA GCGCAACGAC GACTAACCTG
CGCCCGTTGA CTGTGCCAGC GCCGGGGGTG CTGGAGGGGG CGAGCGACCC TGACGGCGAT
CCGCTGACGG CGGTGCTGAT CAGTCCGCCC GCTGGCGGAA CGCTGAGCCT CAACCCGGAC
GGGTCGTACA CCTACACGCC GCGTTCGGAT TTCATCGGCG AGGATGTGTT CCAGATCGCC
GCCTCTGACG GTGAGGCGCA GTCGGCGCCG GTCGAGGTGC GGATCACGGT GCGCAAGGAA
AATCGTCCGC CGACGGCGCG GGGGAGCAGC GCAACGACGA CTAACCTGCG CCCGTTGACT
GTGCCGGCGC CGGGGGTGCT GGAGGGGGCG AGCGACCCTG ACGGCGATCC GCTGACGGCG
GTGCTGATCA GTTCGCCCGC TGGCGGAACG CTGAGCCTCA ACCCGGACGG GTCGTACACC
TACACGCCGC GTTCGGATTT CATCGGCGAG GATGTGTTCC AGATCGCTGC CTCTGACGGC
GAGGCGCAGT CGGCGCCGGT CGAGGTGCGG ATCACGGTGA CGCGCGAGGT TGCTTCGACG
CCAGAGTATC GGGTATTCCT GCCGCTGCTT GTGCGCTGA
 
Protein sequence
MPARFRFLRY VLIVVLLVVS IPLLSAPGHS SFIERMTTPP AAIAQSAAPV GPQPGDVFRQ 
FQDDLNSRQT SVCNSSPANC GTIPSEQQRQ ARNVDLANAV RAEAVFEYWG GHLASTQQEF
NVNGGPWTPY PDIQGIPPDT LPTCYFRAPT NAIAPLPLSG TGGVRPPGST GSTVTVNYRY
RIGPQRSLPQ CASGTNFYWG NMWIYEVTTR IYYNSTIPRP DGAITSPTDG ATITENRSAN
QFPRITVRAQ ASTGRSIARV DLIGNYLDYD WDGDGILREW HYALRHGVWE RTIGTSTSPS
RGTATSGEYD FTWNTEWIPD QDQPVQLMAR ITDNTGVSYM TEAVTVTFNR VGRSVRMYTT
WSDYYGQRVF GPPRNFGFNT YSQPRIGKTA FISIPDPLTN ATRARVILYS WSGRSSTALS
TTVAINAFSV WSGNSFGIFH DYNFDTRDLN NPRDFLNQGD NILRIWSNRT DHALEVLWPG
PAIFVEYSAP PETPVLRAID TSFSTPEDQS LSFTLPVSNQ ARAALQYTIL TPPALGTLRG
IAPNLTYIPN PDVNGSDSFV FRVDDQYGRS ATATVAINIQ AVDDPPEITL GGGALLNPDD
VLDRSGRVRD PDSSSLTATV DYGDGRGEQP LSLGADGSFR LIYRYRNGGR FPLTVRVSDG
AQTSVATVLV TVITPGTPPP PGDWSLTGWR YRVPLEARSG AYPRVDHVAE FDVNFTTALS
QAGGSGALLR ESIRVVEVDA GGNVIDPNVV YQFDPVSAYN PTTNARGTLL VLLRGRTEAN
TTRRFYVYFE TQGRFAPPTF TPLTVVVTPT LIYQRDLATV IETRTSDGQR NATFYYSLNG
GALISMFDRS NADWISYNPA ADSAGAYRGI PNVGPVFHPG YYNVFPIPSA SGPLQGNEPG
TNQRSSTTIE REGTLRTIVR SVSSNGQWEA VWEFFPNSVR MLVLPREPRG SNPFLYWWLY
EGTPGGTLNE GDRWVRGDGL SGIAVDPSFS FNERFHADIN GPEWVYFRAG EPSQGGRALW
LAHHDDTDTT IEMYRYQNDS SGWQNGMTVF GFGRREWDGS SQTLRPELRN QRRFSLGFID
NAPLTFDSAV GREIEGRYRD LAATVGRGER LAPNLAPWAP GETYSVRPGQ TLNVPAPGVR
ANDSDGDGDP FQVTLTGEPQ NGTLTFNSDG SFIYVPNEGF VGADVFTYTA SDGRLSAPPT
TVTILVSPNQ PPTARGSSAT TTNLRPLTVP APGVLEGASD PDGDPLTAVL ISPPAGGTLN
LNPDGSYTYT PRSDFIGEDV FQIAASDGEA QSAPVEVRIT VRKENRPPTA RGSSATTTNL
RPLTVPAPGV LEGASDPDGD PLTAVLISPP AGGTLSLNPD GSYTYTPRSD FIGEDVFQIA
ASDGEAQSAP VEVRITVRKE NRPPTARGSS ATTTNLRPLT VPAPGVLEGA SDPDGDPLTA
VLISSPAGGT LSLNPDGSYT YTPRSDFIGE DVFQIAASDG EAQSAPVEVR ITVTREVAST
PEYRVFLPLL VR